| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG2179 |
|---|
| Symbol | nqrD |
|---|
| ID | 2552245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 2287267 |
|---|
| End bp | 2287896 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637150749 |
|---|
| Product | Na(+)-translocating NADH-quinone reductase subunit D |
|---|
| Protein accession | NP_906229 |
|---|
| Protein GI | 34541750 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
|---|
| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTTT GGAATAAAAA GAATAAGGAA ATTCTTCTCG GGCCGCTAAG CAGCAACAAT
CCCGTTATCG TGCAGATGCT TGGTATCTGC TCTGCTCTGG CCGTAACAGC CAAGCTGCAA
CCGGCTATTG TCATGGCCCT GTCGGTTACT GCGGTAGTAG CTTTTGCCAA CGTTATTATC
TCTCTCCTGC GCAATACGAT CCCCGGACGC ATCCGAATTA TCGTTCAGCT CGTCGTGGTC
GCAGCTCTGG TGACTATCGT GAGTCAGGTA CTGAAAGCCT TCGCTTACGA TGTGAACAAG
CAGTTGTCCG TTTTCGTCGG CCTGATCATT ACCAACTGTA TTTTGATGGG ACGTTTGGAG
GCTTTTGCCT TGGCCAATCG TCCTTGGGAG TCATTCCTCG ATGGTATCGG AAACGGTCTG
GGATATGGAT GGGTTTTGGT TATTATCGCT TTCTTCCGCG AATTGCTCGG CTCCGGTACA
TTGCTGGATA TAAAAGTCAT TCCCAAGAGC TTCTACGAAT CGGGTTATGT CAATAACGGT
CTGATGATCT TGCCGCCGAT GGCTCTGATC ACCGTGGCAG TTGTCATCTG GGTACATCGT
GCCCGTAACA AGGATTTGCA AGAGAACTAA
|
|---|
| Protein sequence | MSLWNKKNKE ILLGPLSSNN PVIVQMLGIC SALAVTAKLQ PAIVMALSVT AVVAFANVII
SLLRNTIPGR IRIIVQLVVV AALVTIVSQV LKAFAYDVNK QLSVFVGLII TNCILMGRLE
AFALANRPWE SFLDGIGNGL GYGWVLVIIA FFRELLGSGT LLDIKVIPKS FYESGYVNNG
LMILPPMALI TVAVVIWVHR ARNKDLQEN
|
|---|
| |