| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG2090 |
|---|
| Symbol | |
|---|
| ID | 2552641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | + |
|---|
| Start bp | 2190370 |
|---|
| End bp | 2191278 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637150668 |
|---|
| Product | cation efflux family protein |
|---|
| Protein accession | NP_906151 |
|---|
| Protein GI | 34541672 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTACAC TTTCGGATCC TAATCGGCGT TCTCGACGTA TCAAACGTAT TACGATAGTC
GGTTGCTTAG GTAATCTGCT TTTGACGATC GGGAAGTTTT TCTCCGGTTT TGTCGGGCAT
AGCGGAGCCA TGATTGCCGA TGCGGTACAC TCGTTGTCTG ATCTGCTGAC CGATTTCGTG
GTTTTCATTT TTATCTCCAT TTCGGGAAAA CCATCCGATA AGAACCACGA TTACGGACAT
GGTAAGTTCG AGACCCTCGC CACTGCGATC ATTGCTGTTA CGCTGATCAT CATCGGAGCT
ATGCTCTGCT CCGATGGTCT GACCAAGGTA TATCGCTATC TCCGCTTTGG GGACGAATTG
GCTCGTCCCG GATTGATAGC CTTGCTTATG GCCTTTGTCT CCATTGTGGC CAAAGAGTGG
CTGTTCCGCA TAACGCGATG TGTCGGAAAA GAGGAAAATA GTCGTTCAGT CATAGCCAAT
GCCTGGCACC ACCGTAGTGA CGCTTATACC TCTGTGGCTA CTTTCATCGG GATTGGCTGT
GCTTTTCTTT TGGGGCGCGG TTGGATGATC CTCGAACCGC TATCGGCTGC TGTAGTAAGT
GTCTTTATCA TCAAGGTAGG TTTTCAAATG GCCGTTCCGG CTTTCCGCGA TCTGCTCGAA
CAGAGCTTGC CGGATGATAT TGAAGAAGAG ATAGAAAAAA TCATTTGTTC GGAATCGATG
GTAAAAGGTG TTCGTCGGAT CCGCACTCGC AATATCGGTA ATTACTATGC TGTCGAAGCC
GATATTTTGA TGGATGGAGG CCTCTCTGTG GCACTATCTC ATGCTGCTAC GCAGAGGGTT
GAGAAGCTGC TGCGTGGACG ATACGGCCAA CCCACACATA TAGTCATCCA CGTCGAGCCG
TTTTCATGA
|
|---|
| Protein sequence | MVTLSDPNRR SRRIKRITIV GCLGNLLLTI GKFFSGFVGH SGAMIADAVH SLSDLLTDFV
VFIFISISGK PSDKNHDYGH GKFETLATAI IAVTLIIIGA MLCSDGLTKV YRYLRFGDEL
ARPGLIALLM AFVSIVAKEW LFRITRCVGK EENSRSVIAN AWHHRSDAYT SVATFIGIGC
AFLLGRGWMI LEPLSAAVVS VFIIKVGFQM AVPAFRDLLE QSLPDDIEEE IEKIICSESM
VKGVRRIRTR NIGNYYAVEA DILMDGGLSV ALSHAATQRV EKLLRGRYGQ PTHIVIHVEP
FS
|
|---|
| |