| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG2087 |
|---|
| Symbol | |
|---|
| ID | 2551496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | + |
|---|
| Start bp | 2187130 |
|---|
| End bp | 2187603 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637150665 |
|---|
| Product | rRNA large subunit methyltransferase |
|---|
| Protein accession | NP_906148 |
|---|
| Protein GI | 34541669 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1576] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCG TACTGCTCGT TGTAGGCAAG ACCGACAGCA AACTAATGGT TCAGGCAACG
GAGGAATACA TTCGTCGGTT GAGCCATTAT GTTTCTTTCG AAGTGGAGGT AATACCCGAT
GTCCGTCTGG GTAGCAAGCT TTCTTCCGAA CAGCAAAAGG ATGCCGAAGG TCGGGAGATA
CTCGCTCGTC TTCGGCCGTC GGACAGCACC GTATTGCTCG ATGAGCGAGG CAGAGAGTAT
TCCAGCATGG AGTTTTCAGC CTTTTTGCAG AAGAAAATGC TGATCGGCAC CCGTCGAATG
GTCTTTGTCA TAGGAGGCCC ATATGGATTT AGCCCTGCAG TGCAGGAGGC TGTAACCGAT
AGAATATCGC TCAGCCGAAT GACTTTCTCT CATCAGATGA TCCGCCTCTT CTTCACCGAA
CAGGTGTATC GTGCCATGAC TATTCTCAAC CATGAGCCCT ATCATCATGA ATAG
|
|---|
| Protein sequence | MKIVLLVVGK TDSKLMVQAT EEYIRRLSHY VSFEVEVIPD VRLGSKLSSE QQKDAEGREI
LARLRPSDST VLLDERGREY SSMEFSAFLQ KKMLIGTRRM VFVIGGPYGF SPAVQEAVTD
RISLSRMTFS HQMIRLFFTE QVYRAMTILN HEPYHHE
|
|---|
| |