| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG2060 |
|---|
| Symbol | thyA |
|---|
| ID | 2552923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | + |
|---|
| Start bp | 2157713 |
|---|
| End bp | 2158516 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637150634 |
|---|
| Product | thymidylate synthase |
|---|
| Protein accession | NP_906122 |
|---|
| Protein GI | 34541643 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0207] Thymidylate synthase |
|---|
| TIGRFAM ID | [TIGR03284] thymidylate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGTGGTA TGAAACAGTA TTTGGATCTG CTTCGCCGCA TCCTCGACGA GGGAGTACGA
AAAGAAGACC GCACGGGTAC GGGTACGATC AGCGTATTCG GCCATCAGAT GTGCTTTGAC
CTTGAAGAGG GATTTCCCTT GCTTACGACC AAGCGATTGC ACTTGAAGTC CATTATATAC
GAACTGCTTT GGTTCCTCAG AGGTGACACG AACGTGCATT ACCTGCAGGA ACATGGCGTA
CGCATTTGGA ACGAATGGGC TGATGAGAAC GGCGATTTGG GACCTATATA TGGCTACCAG
TGGCGCAGTT GGCCGGACTA TCGGGGAGGG CATATAGACC AAATGCAGGA GGTGCTGCGC
CAGCTGCGCG AAGAACCGGA CAGCCGGCGC ATTATCGTAT GCTCGTGGAA TGTAGGCCAG
CTTGCCGATA TGCATCTGCC TCCATGCCAC TGTTTCATGC AGTTCTATGT CGCTGACGGC
CGGCTGAGCC TGCAACTCTA TCAGCGCAGT GCCGATTCTT TTCTGGGCAT ACCGTTCAAC
ATAGCTTCGT ATGCACTCCT GCTACAAATG ATCGCTCATG TCACAGGGCT GAAACCCGGG
CGATTCGTAC ATACACTGGG CGACGCCCAT ATCTATCTTA ACCACCTCGA ACAGGTACAG
CTACAACTGA GTCGTGAGCC GAGAGCGTTG CCCCGAATGG TACTGAATCC GGAGGTGTCC
GATCTCTTCG ACTTCCGATA CGAAGACTTC CGACTCGAAG GGTATGATCC GCATCCGCAC
ATTGCGGGCG TTGTAGCAGT CTGA
|
|---|
| Protein sequence | MRGMKQYLDL LRRILDEGVR KEDRTGTGTI SVFGHQMCFD LEEGFPLLTT KRLHLKSIIY
ELLWFLRGDT NVHYLQEHGV RIWNEWADEN GDLGPIYGYQ WRSWPDYRGG HIDQMQEVLR
QLREEPDSRR IIVCSWNVGQ LADMHLPPCH CFMQFYVADG RLSLQLYQRS ADSFLGIPFN
IASYALLLQM IAHVTGLKPG RFVHTLGDAH IYLNHLEQVQ LQLSREPRAL PRMVLNPEVS
DLFDFRYEDF RLEGYDPHPH IAGVVAV
|
|---|
| |