Gene PG2053 details

Gene Information

• Locus tag: PG2053
• Symbol: bioD
• ID: 2552034
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 2150674
• End bp: 2151327
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637150628
• Product: dithiobiotin synthetase
• Protein accession: NP_906117
• Protein GI: 34541638
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0132] Dethiobiotin synthetase
• TIGRFAM ID: [TIGR00347] dethiobiotin synthase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 13
• Fosmid unclonability p-value: 0.0534973
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCCATCA TTCCCTCTAA AGTCCTGTTT GTAACCGGAA TAGACACGAA TATCGGGAAA 
ACCTATGCCA CGGCTTTTCT TTTCGACAAG CTCTCCGAGT CAGGGCAAAA GGTCATCACC 
CAAAAGCTCG TACAGACGGG ATGTGTAGGT GCTTCGGAGG ATATAGAAGC ACACCGTCGT 
CTGACCGGAT ACCCTACAAT GGAAGAAGAT GGTTTGGGAC TTACTTGCCC CTATATTTTC 
AGTTATCCGG CTTCTCCTCA CTTTGCAGCC GAGATAGATG GTAAAAGGGT GGACTGCAAG 
ATAATAGACC AAGCTACTGA AACTCTCCTC TCTCGTGGCT ACGATCGCAT CCTTCTGGAA 
GGAGCCGGCG GACTGATGGT GCCCATCACC AAGGACTATC TTACAGCTGA TTTTATAGCT 
GACAGAGATT ATCCTATTGC ACTCGTGACG AGTGGCCGAC TGGGGAGTAT CAACCACACG 
CTACTCAATT TGGAATTGTG CCGACACAGA GGTATTCCGG TCGAATCCAT TGTCTACAAT 
CTTTATCCTG CCGAAGACGA CCGTATTATT GCTAACACCC TTGATTATCT CCGTTTCTAT 
CTGCATAAAT ATCATCCCGA TACGCAACTT ATGGTGATGC CGGAACGGAA TTGA 

 

Protein sequence

MPIIPSKVLF VTGIDTNIGK TYATAFLFDK LSESGQKVIT QKLVQTGCVG ASEDIEAHRR 
LTGYPTMEED GLGLTCPYIF SYPASPHFAA EIDGKRVDCK IIDQATETLL SRGYDRILLE 
GAGGLMVPIT KDYLTADFIA DRDYPIALVT SGRLGSINHT LLNLELCRHR GIPVESIVYN 
LYPAEDDRII ANTLDYLRFY LHKYHPDTQL MVMPERN