| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG2052 |
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| Symbol | dapA |
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| ID | 2552035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 2149776 |
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| End bp | 2150645 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637150627 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | NP_906116 |
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| Protein GI | 34541637 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0341235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGTTG CCCTGATTAC CCCTTTCGAC GAAAAGGGCG GGGTAGACCA CGAATCGCTT
CGACTTTTAG CGGATTATCA GGTAGCGGGA GGTGCCAACT ACATCGTAGT ACTTGGCACA
ACGGGTGAAT CGCCCACCAT CGAGGATGCC GAGCGCTCTG CGATATTGCA AACAGTCAGA
GAGGCGGTGG CAGGACGGTG TCCGATCATC GTTGGAGCCG GAGGCAACTA CACCGAACGC
CTCGTCAATC GGATTCAAGC CATGGACAAG ACCGGTGTAG ATGCCATCTT ATCCGTTGCT
CCTTACTACA ACAAACCCAC GCAAGAAGGC ATTTATAGAC ATTATAGGAC TTTGGCCGAA
TCTACTGATA CGTCCATCAT CCTCTACAAT GTCCCCGGGC GAACGGGTGT GAATATTAAG
TCCGAAACCA CTCTCAGATT GGCTACAGAC TGTCCGAATA TCATCGGCAT CAAAGAAGCT
TCGGGCAATG TGGATCAAGT GCGTGCAATA GTGCTGGAAA AACCCGATCC TTTCATTGTC
CTATCAGGCG ACGATCATCT CTCCCTTTCC TTTATAAAGG AAGGAGCCGA GGGAGTTATT
TCCGTGATCG GAAATGCCTA TCCGGAGCTT TTCAGTCGTT TGATACATCT GTGTTTGGAA
AACCGATTTG AAGAAGCCGA AACCATCCAA CAACGACTGG AAGGAATGTA CTACCTGATG
TTTGTCGATG GTAATCCGGC CGGAATCAAG GAATTGCTCT ATCAAAAGGG TCTCATCCGT
CACAATATAC TAAGGCTGCC GCTTGTATCT GCATCGGACT CTACCTCTAC TTTGATTGCC
AGAGTTCGCA ATCAGATCGA ACAGCGGTAA
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| Protein sequence | MGVALITPFD EKGGVDHESL RLLADYQVAG GANYIVVLGT TGESPTIEDA ERSAILQTVR
EAVAGRCPII VGAGGNYTER LVNRIQAMDK TGVDAILSVA PYYNKPTQEG IYRHYRTLAE
STDTSIILYN VPGRTGVNIK SETTLRLATD CPNIIGIKEA SGNVDQVRAI VLEKPDPFIV
LSGDDHLSLS FIKEGAEGVI SVIGNAYPEL FSRLIHLCLE NRFEEAETIQ QRLEGMYYLM
FVDGNPAGIK ELLYQKGLIR HNILRLPLVS ASDSTSTLIA RVRNQIEQR
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