Gene PG2015 details

Gene Information

• Locus tag: PG2015
• Symbol: cas4
• ID: 2553095
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 2105592
• End bp: 2106104
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637150593
• Product: CRISPR-associated Cas4 family protein
• Protein accession: NP_906083
• Protein GI: 34541604
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1468] RecB family exonuclease
• TIGRFAM ID: [TIGR00372] CRISPR-associated protein Cas4

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATACAA TATCAGGCAC GCACTTCAAC TATCATCAGG TTTGTCGGAG AAAGCTATGG 
CTTTTCTCTG CAGGTATTAC GATGGAGCAT ACATCTGATT TAGTATACGA GGGGAAATTG 
ATCCATGAGA CAACGTACCA GCAACGACCG GAGCGATACC AAGAATTGGA GTTGGACGGC 
ATCAAGATAG ACTTTTATGA CGCAAAAAAC AGAGTGGTTC ACGAGGTCAA AAAGTCTAAC 
AAAATATCGC CTGCCCACAG ACTCCAACTA CTCTATTACT TATATGTATT GGAGCGTAAT 
GGGGTATTGG GAGCAACGGG GATATTGGAG TATCCGACTC TACGAAAAAA GGAAGAAGTG 
ATTCTTTCTG ACATAGATCG CGAACGGATC AGAGAGATCG AGCAGGAGAT CCTACAGATT 
ATCAGTCACG AGGATTGTCC TCCTGTTATC GACTCCGGGA TCTGTAAAAA CTGTAGCTAT 
TACGAATTCT GCTTCTCGGG AGAAGAGCAA TGA 

 

Protein sequence

MNTISGTHFN YHQVCRRKLW LFSAGITMEH TSDLVYEGKL IHETTYQQRP ERYQELELDG 
IKIDFYDAKN RVVHEVKKSN KISPAHRLQL LYYLYVLERN GVLGATGILE YPTLRKKEEV 
ILSDIDRERI REIEQEILQI ISHEDCPPVI DSGICKNCSY YEFCFSGEEQ