| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1996 |
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| Symbol | deoC |
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| ID | 2553165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 2086061 |
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| End bp | 2086930 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637150578 |
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| Product | deoxyribose-phosphate aldolase |
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| Protein accession | NP_906068 |
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| Protein GI | 34541589 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
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| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.734647 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCAA ATAAATACGA AATGGCCTTC GCTCAGTTCG ATCCGGCCGA GTCAGAAGAG
AGAATTTTAC TGAAAACCGA TCAAATAATA CGGGATCACT ATTCACGATT CGACACTCCG
GAAACGAAGA AATTCCTGCA TGGCGTCATC GATCTGACCA GCCTGAACGC CACGGATTCG
GAGGAGTCCA TCACAAAGTT TACCGAGAGC GTCAATGACT TCGAGGACAC AGATCCCACG
ATTCCATCCG TAGCGGCGAT CTGCGTATAC CCCAACTTCG TCTCCACCGT GAGAGAAACG
CTCACAGCCG AAAACGTGAA AGTGGCCAGC GTCAGTGGCT GTTTCCCCGC TTCACAGAGC
TTTATCGAAG TTAAGTTGGC CGAAACGGCA CTGGCCGTAA GCGATGGAGC AGATGAAATA
GACATAGTAC TCAATATGGG TAAGTTCCTA AGTGGGGACT ATGAAGCAGC GGCCACGGAA
ATCGAAGAGC AAATAGCAGC AGCAAAGGGA GCTACCGTCA AAGTGATACT GGAGACAGGC
GCATTGAAAA CACCGGAGAA TATCCGTCGC GCTACGATTC TCTCCCTTTT CTGCGGTGCA
CATTTTGTAA AGACATCCAC AGGCAAAGGC TACCCCGGAG CGAGCCTTGA AGCAGCCTAT
ACGATGTGCA AGGTGCTGAA ACAGTACTAC GGACTTTTTG GCGAAGTACG TGGTATCAAA
CTGTCCGGAG GCATTCGCAC AACTGAAGAT GCTGTGAAAT ACTACTGTCT GATCGAAACG
CTTTTGGGCA AAGAATGGCT TACGCCGGCA TATTTCCGCA TAGGAGCCAG CAGCTTGGTG
GACGCCCTCC GGCAGGATAT TATGGTCTAA
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| Protein sequence | MAANKYEMAF AQFDPAESEE RILLKTDQII RDHYSRFDTP ETKKFLHGVI DLTSLNATDS
EESITKFTES VNDFEDTDPT IPSVAAICVY PNFVSTVRET LTAENVKVAS VSGCFPASQS
FIEVKLAETA LAVSDGADEI DIVLNMGKFL SGDYEAAATE IEEQIAAAKG ATVKVILETG
ALKTPENIRR ATILSLFCGA HFVKTSTGKG YPGASLEAAY TMCKVLKQYY GLFGEVRGIK
LSGGIRTTED AVKYYCLIET LLGKEWLTPA YFRIGASSLV DALRQDIMV
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