Gene PG1992 details

Gene Information

• Locus tag: PG1992
• Symbol: gidA
• ID: 2553190
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 2081550
• End bp: 2083427
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637150574
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: NP_906064
• Protein GI: 34541585
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAATTCA ATTATGATGT CATCGTGGTG GGTGCGGGCC ATGCCGGCTG CGAAGCGGCT 
GCGGCTGCGG CCAAGCTCGG TTCGCAGGTA TTGCTCATCA CGCCGGACAT GAACAAAATA 
GCCCAAATGA GCTGCAATCC GGCTGTCGGA GGAATAGCTA AGGGCCAGAT AGTCAGGGAG 
ATAGACGCCT TAGGGGGACG AATGGGTATC GTCACGGATG CTACGGCCAT CCAGTTTCGT 
ATGCTCAATC GGAGCAAAGG CCCTGCCATG TGGAGTCCGC GCGCTCAGAG CGACCGCATG 
CGCTTCATGG AAGCGTGGCG CGATATAGTG GAGCACGAGC CTAATCTGTA CATGTGGCAG 
GACAGTGTAC GCTGCCTCTC TATTCGTCAG GGTGCCGTCG CGGGAGTCGT GACGGCTCTC 
GGGGTAGAGT TTCAGGCTCG TACCGTGGTG CTGACTACAG GCACTTTCCT CGGAGGTGTC 
ATGCACTTCG GGGAGCGTAT GATCGAAGGA GGACGAATAG CCGAACCGGC TTTCCACGGC 
ATCACGGAGC AGCTTCGTGA TCTGGGCTTC AGAACCGACA GAATGAAGAC GGGGACTCCG 
GCACGAATCG ACGGCCGGAG CATCGATTTC AGTCTGACCA CAGAGCAGTC GGGAGAAGAG 
GATCACCACC GTTTCTCCTA TATGGATACG CCCCGAAGGG TGCTACGCCA AAGGAGTTGC 
TACGCACTCT ACACCAATCC CGAGTGTCAT GAGATACTAA GCAAAGGGTT GGATCGCTCC 
CCCCTGTACA ACGGACAGAT CCAAAGCATC GGCCCTCGAT ACTGCCCCAG CATAGAGACC 
AAGATCGTCA CCTTCGCCGA CAAGGAGATG CACCAACTGT TTCTCGAACC GGAAGGAGAG 
ACCAGTAACG AGTTTTACCT CAATGGCTTC TCCTCGTCTT TGCCCTTGGA GATTCAGCTC 
GAAGCCCTGA AAGCCATTCC GGCTCTTCGC CATGTGCACA TCTATCGTCC GGGGTATGCC 
ATCGAATACG ACTTCTTCGA TCCCACACAA TTAAGACATA CGCTTGAAAC CAAGCCGGTG 
AAAGGGCTGT TCTTCGCCGG TCAGATCAAT GGCACGACCG GCTATGAGGA GGCCGCCGGA 
CAGGGACTGA TAGCCGGCAT CAATGCTCAC CTGCATTGCC ATGGCGCAGG CGAGTTCACA 
CTCGGACGGG ATGAGGCTTA CATAGGGGTA CTGATCGATG ACTTGGTGAG CAAAGGCGTG 
GACGAGCCCT ACCGCATGTT TACATCCCGA GCCGAATATC GCATCTTGCT ACGTCAGGAC 
GATGCCGACA TGAGGCTCAC ACCGAAGGCG GAAGCGATCG GGCTGGCAGA CAGCAGACGC 
AGCGAATTGC TCCGAGAAAA GCAAGTATTT CGCGATAAGC TGATCGACTT TACGCACAAG 
TTTTCCCTCA AACCGGATCT GATCAACCCG CATCTGGAGT CGGCCGGCCA CCTTCCTCTC 
AAGCAAGGAA TCAAACTGTA CGACCTGCTG CTCCGTCCTC AAATAGGAAT GAATGAAGTC 
TGTTCGATGG TGCCCTCTCT CCAAAGAATC GTGGAAGAGA TCCCGGCATC CAGACGAGAG 
GAAATCGTGG AAGCTGCAGA GATCCTGATC AAATACGACG GCTATATCAA AAGAGAAAGA 
GCCTTGGCCG ACAAGATCAA CAGACTCGAA AGTATCCGAC TTCCGCAGCA TGTAGATTAT 
ATGCAGATGC AGTCCCTCTC CACCGAAGCA CGCCAAAAAC TGACGAGCAT CCGGCCGGAA 
ACCATCGCGC AAGCATCTCG AATACCGGGA GTCTCTCCCC ACGACGTAAG CATCCTTCTC 
GTACTCTGCG GAAGATAA 

 

Protein sequence

MQFNYDVIVV GAGHAGCEAA AAAAKLGSQV LLITPDMNKI AQMSCNPAVG GIAKGQIVRE 
IDALGGRMGI VTDATAIQFR MLNRSKGPAM WSPRAQSDRM RFMEAWRDIV EHEPNLYMWQ 
DSVRCLSIRQ GAVAGVVTAL GVEFQARTVV LTTGTFLGGV MHFGERMIEG GRIAEPAFHG 
ITEQLRDLGF RTDRMKTGTP ARIDGRSIDF SLTTEQSGEE DHHRFSYMDT PRRVLRQRSC 
YALYTNPECH EILSKGLDRS PLYNGQIQSI GPRYCPSIET KIVTFADKEM HQLFLEPEGE 
TSNEFYLNGF SSSLPLEIQL EALKAIPALR HVHIYRPGYA IEYDFFDPTQ LRHTLETKPV 
KGLFFAGQIN GTTGYEEAAG QGLIAGINAH LHCHGAGEFT LGRDEAYIGV LIDDLVSKGV 
DEPYRMFTSR AEYRILLRQD DADMRLTPKA EAIGLADSRR SELLREKQVF RDKLIDFTHK 
FSLKPDLINP HLESAGHLPL KQGIKLYDLL LRPQIGMNEV CSMVPSLQRI VEEIPASRRE 
EIVEAAEILI KYDGYIKRER ALADKINRLE SIRLPQHVDY MQMQSLSTEA RQKLTSIRPE 
TIAQASRIPG VSPHDVSILL VLCGR