Gene PG1963 details

Gene Information

• Locus tag: PG1963
• ID: 2553280
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 2052478
• End bp: 2053053
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637150551
• Product: Sua5/YciO/YrdC/YwlC family protein
• Protein accession: NP_906041
• Protein GI: 34541562
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0009] Putative translation factor (SUA5)
• TIGRFAM ID: [TIGR00057] Sua5/YciO/YrdC/YwlC family protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 23
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTCAACG ATATTCAGAG AAGTGAAGCG AAGAAAGCCG CCGAAGTCAT GCGCAAAGGC 
GGAATCATCC TTTACCCGAC AGATACCATT TGGGGAATAG GCTGCGATGC CACGAACGAA 
GAAGCCGTCC AGCGGATTTA CCGGCTGAAA GAAAGAGCGG ACAGCAAGAG CATGCTTGTC 
CTCATCGATT CGGAAGCGAA GCTCCAAGGC CTCATGGACG AAGTGCCGGA GTTGGCCTGG 
GATCTGATCG AGCTGACGAC CAAACCGCTG ACCATCATCT ATCCTCAGGC CAAAGGCGTG 
GCGCCGGCAC TCATCGCTTC GGACGGATCG CTGGGCATTC GCCTGACGCG TGAAACCTTC 
TCTGCCGAGC TATGCAGACT GATGCGTGTC CCCATAGTCT CCACGTCGGC CAATATCAGC 
GGCCAACCCT CGGCACGGAC TTTCGGCGAG ATCGCTCCGG CCATCTTAGA CGGTGTGGAT 
TATATAGTGG AGTGCCGGCG CGAAGAGCCG GCCGGTCAGG CCTCTTCGAT CATTCGACTC 
GGCACAAGGG GAGAAGTGGA GGTGATCCGC CAATGA 

 

Protein sequence

MLNDIQRSEA KKAAEVMRKG GIILYPTDTI WGIGCDATNE EAVQRIYRLK ERADSKSMLV 
LIDSEAKLQG LMDEVPELAW DLIELTTKPL TIIYPQAKGV APALIASDGS LGIRLTRETF 
SAELCRLMRV PIVSTSANIS GQPSARTFGE IAPAILDGVD YIVECRREEP AGQASSIIRL 
GTRGEVEVIR Q