| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1949 |
|---|
| Symbol | mdh |
|---|
| ID | 2552158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 2038274 |
|---|
| End bp | 2039278 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637150541 |
|---|
| Product | malate dehydrogenase |
|---|
| Protein accession | NP_906031 |
|---|
| Protein GI | 34541552 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTACT TAACAGAAGA GAAATTGACC ATTGTCGGTG CAGCCGGTAT GATTGGTTCC
AACATGGCAC AGACAGCTGC AATGATGCGT CTGACCCCTA ATTTGTGTTT GTATGATCCT
TTCGCAGTAG GTTTGGAAGG CGTGGCAGAG GAAATCCGTC ACTGCGGATT CGAAGGCCTG
AATCTGACTT TTACATCCGA CATCAAAGAG GCTCTTACAG ATGCCAAATA TATAGTTTCT
TCGGGCGGTG CTCCGCGCAA AGAGGGTATG ACCCGCGAGG ATCTGCTCAA GGGCAATGCC
GAAATCGCTG CTCAGCTGGG CAAGGACATC AAGAGCTATT GTCCCGACTG TAAGCACGTG
ATCATCATCT TCAATCCGGC TGACATCACC GGTCTTGTTA CGCTTATCTA CTCCGGGCTG
AAGCCTTCGC AGGTGACTAC TTTGGCCGGT TTGGACAGCA CACGTCTGCA AAGCGAACTG
GCTAAGCACT TCGGCATCAA ACAAAGTCTC GTGACCAACA CGCGTACTTA TGGAGGTCAT
GGCGAGCAGA TGGCTGTTTT CGCCAGCACG GCCAAGGTAA ACGGAACGCC TCTGACCGAT
CTGATCGGTA CCGACAAGCT GACCAACGAG CAGTGGGCAG AACTGAAACA GCGTGTCGTG
AAGGGGGGAG CCAACATTAT CAAGCTACGT GGTCGCTCGT CTTTCCAAAG CCCTTCTTAC
GTGTCTATCG AAATGATTCG TGCCGCCATG GGGGGCGAAG CTTTCCGTTG GCCGGCCGGC
TGCTACGTGA ATGTGCCGGG CTTCGAGCAC ATCATGATGG CTATGGAGAC TACTATCACG
AAAGATGGCG TGAAGTACAG CGATATTAAC CAACTCGGCA ACGAAGCAGA GCGCGCTGCC
CTCAAAGAGA GCTATAGCCA CCTGGCTAAG CTGCGCGACG AAGTGATCGC CATGGGCATC
ATTCCCGCGA TCGCTGACTG GAAGACGGTG AATCCGAACC TCTAA
|
|---|
| Protein sequence | MSYLTEEKLT IVGAAGMIGS NMAQTAAMMR LTPNLCLYDP FAVGLEGVAE EIRHCGFEGL
NLTFTSDIKE ALTDAKYIVS SGGAPRKEGM TREDLLKGNA EIAAQLGKDI KSYCPDCKHV
IIIFNPADIT GLVTLIYSGL KPSQVTTLAG LDSTRLQSEL AKHFGIKQSL VTNTRTYGGH
GEQMAVFAST AKVNGTPLTD LIGTDKLTNE QWAELKQRVV KGGANIIKLR GRSSFQSPSY
VSIEMIRAAM GGEAFRWPAG CYVNVPGFEH IMMAMETTIT KDGVKYSDIN QLGNEAERAA
LKESYSHLAK LRDEVIAMGI IPAIADWKTV NPNL
|
|---|
| |