Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1942 |
Symbol | rpsL |
ID | 2552165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 2028036 |
End bp | 2028440 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637150534 |
Product | 30S ribosomal protein S12 |
Protein accession | NP_906024 |
Protein GI | 34541545 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0048] Ribosomal protein S12 |
TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTACAA TTCAACAGTT GGTTAGAAAG GGTCGTGAAT CTTTCGCGGA TAAGAGCAAA TCGCCGGCAT TGAATTCGTG CCCGCAGCGT CGCGGCGTTT GTGTGCGCGT TTATACGACT ACGCCCAAGA AGCCGAATTC GGCTATGCGT AAGGTGGCGC GTGTGCGTCT GACGAATTCC AAAGAAGTCA ATGCCTACAT CCCCGGAGAG GGTCACAACT TGCAGGAACA CAGCATCGTG CTGGTTCGTG GAGGTCGTGT GAAGGACTTG CCCGGTGTGC GCTATCACAT TGTTCGTGGC ACGCTCGATA CAGCAGGTGT GAATGGCCGT ACGCAGCGTC GTTCCAAATA CGGTGCCAAG CGTCCGAAGC CCGGACAGGC TCCTGCCGCT AAAGGTAAGA AGTAA
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Protein sequence | MPTIQQLVRK GRESFADKSK SPALNSCPQR RGVCVRVYTT TPKKPNSAMR KVARVRLTNS KEVNAYIPGE GHNLQEHSIV LVRGGRVKDL PGVRYHIVRG TLDTAGVNGR TQRRSKYGAK RPKPGQAPAA KGKK
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