Gene PG1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG1942 
SymbolrpsL 
ID2552165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand
Start bp2028036 
End bp2028440 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content55% 
IMG OID637150534 
Product30S ribosomal protein S12 
Protein accessionNP_906024 
Protein GI34541545 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0048] Ribosomal protein S12 
TIGRFAM ID[TIGR00981] ribosomal protein S12, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACAA TTCAACAGTT GGTTAGAAAG GGTCGTGAAT CTTTCGCGGA TAAGAGCAAA 
TCGCCGGCAT TGAATTCGTG CCCGCAGCGT CGCGGCGTTT GTGTGCGCGT TTATACGACT
ACGCCCAAGA AGCCGAATTC GGCTATGCGT AAGGTGGCGC GTGTGCGTCT GACGAATTCC
AAAGAAGTCA ATGCCTACAT CCCCGGAGAG GGTCACAACT TGCAGGAACA CAGCATCGTG
CTGGTTCGTG GAGGTCGTGT GAAGGACTTG CCCGGTGTGC GCTATCACAT TGTTCGTGGC
ACGCTCGATA CAGCAGGTGT GAATGGCCGT ACGCAGCGTC GTTCCAAATA CGGTGCCAAG
CGTCCGAAGC CCGGACAGGC TCCTGCCGCT AAAGGTAAGA AGTAA
 
Protein sequence
MPTIQQLVRK GRESFADKSK SPALNSCPQR RGVCVRVYTT TPKKPNSAMR KVARVRLTNS 
KEVNAYIPGE GHNLQEHSIV LVRGGRVKDL PGVRYHIVRG TLDTAGVNGR TQRRSKYGAK
RPKPGQAPAA KGKK