Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1937 |
Symbol | rplD |
ID | 2551995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 2023597 |
End bp | 2024226 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637150529 |
Product | 50S ribosomal protein L4 |
Protein accession | NP_906019 |
Protein GI | 34541540 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGA GCGTATATAA TATCAAAGGA GAAGATACGG GTAAGAAAGT CGTTCTGGAC GACTCGATCT TCGCGATAGA GCCTAACGAC CATGCTATCT ACTTGGATGT AAAGCAGTAC ATGGCCAACC AGCGCCAAGG TACGCACAAG GCCAAAGAGC GTAGCGAACT TTCCGGTAGT ACGCGCAAGC TGATCCGTCA GAAGGGTAGC GGTGGAGCAC GTCGTGGTGA TATCAACTCA CCCCTTCTCA GTGGCGGTGC TCGTGTTTTC GGTCCGCGTC CTCGTAACTA CAGCTTCAAG CTGAACAAGA AGCTGAAGGC TTTGGCTCGT CGTTCGGCTC TGAGCTACAA AGCGAAGAAC AATGAGATCA TCGTCGTGGA GGACTTTAAC TTCGATGCTC CCAAAACAAA GGCTTTCAAG GCTATTTCTG CCGCATTGAA GGTGGGCGAA AAGAAAGTAC TCTACGTCCT TCCCGAGGTG AATAAGAATG TGTACTTGTC TGCTCGCAAC CTGCCGAATA CGAATTTGAT TCTTGCCAAT CTGATCAATA CTTACACAGT GTTGGCTTCC AAGAATCTCG TGCTGACAGA GCGTTCTGTT GCCGTTGTTA ATGAACTATT TAAAGCATAA
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Protein sequence | MELSVYNIKG EDTGKKVVLD DSIFAIEPND HAIYLDVKQY MANQRQGTHK AKERSELSGS TRKLIRQKGS GGARRGDINS PLLSGGARVF GPRPRNYSFK LNKKLKALAR RSALSYKAKN NEIIVVEDFN FDAPKTKAFK AISAALKVGE KKVLYVLPEV NKNVYLSARN LPNTNLILAN LINTYTVLAS KNLVLTERSV AVVNELFKA
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