Gene PG1923 details

Gene Information

• Locus tag: PG1923
• Symbol: rplF
• ID: 2551539
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 2017480
• End bp: 2018031
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637150515
• Product: 50S ribosomal protein L6
• Protein accession: NP_906005
• Protein GI: 34541526
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 27
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCAAGAA TTGGTAAGTT GCCCATCAGC ATCCCCGCTG GTGTGACGGT ATCTCACAAG 
GATGAAATCG TAACAGTAAA AGGTCCTAAG GGCGAATTGT CACAATACGT AGATCCTCGA 
ATCACTGTTG TGATAGAAGG TGGTATGATC CATTTAGAGC GCAAGACCGA TGACCGTATC 
GAACGCTCTT TGCATGGTCT CTATCGTTCC TTGATTAATA ATATGGTGCA GGGTGTTTCT 
GCCGGTTTTA AGCGTGAACT CGAACTCGTT GGGGTAGGCT ATAGAGCCTC TAATCAAGGG 
CAGCTCCTTG AGCTTTCCTT GGGTTTTACG CACAGCATTT TCATGCAGCT GCCCAAAGAG 
GTGACAGTTG AAACCAAGAG CGAGAGAAAC AAAAACCCTT TGATTATCCT CGAAAGTGCT 
GACAAGCAGC TTCTTGGTCA AGTGTGTATG AAGATTCGAT CATTCAGAAA ACCTGAACCG 
TACAAAGGTA AGGGTGTCAA GTTTGTCGGT GAGCAAATTC GCAGGAAGTC TGGTAAATCT 
GCTGGAAAAT AA 

 

Protein sequence

MSRIGKLPIS IPAGVTVSHK DEIVTVKGPK GELSQYVDPR ITVVIEGGMI HLERKTDDRI 
ERSLHGLYRS LINNMVQGVS AGFKRELELV GVGYRASNQG QLLELSLGFT HSIFMQLPKE 
VTVETKSERN KNPLIILESA DKQLLGQVCM KIRSFRKPEP YKGKGVKFVG EQIRRKSGKS 
AGK