| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1914 |
|---|
| Symbol | rpsM |
|---|
| ID | 2551582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 2013028 |
|---|
| End bp | 2013408 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637150506 |
|---|
| Product | 30S ribosomal protein S13 |
|---|
| Protein accession | NP_905996 |
|---|
| Protein GI | 34541517 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0099] Ribosomal protein S13 |
|---|
| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATAA GAATAGTTGG CGTTGACTTG CCACAAAACA AAAGAGGTTT TATCGCTTTG
ACTTATATCT ATGGTATCGG CCGCAGTAGT GCTATTACCA TTTTGGATAA AGCCGGAGTA
GACCGCGATA TCAAGGTTAA AGATTGGTCG GATGACCAAG CTGCTGCCAT TCGTGATGTT
ATCGGTGCCG GATACAAAGT AGAGGGAGAT TTACGTTCTG AGGTGCAGTT GAATATCAAG
CGTCTCATGG ATATCGGCTG CTATCGTGGT ATTCGCCATC GTATCGGTCT GCCTCTGCGT
GGCCAGAGCA CAAAGAACAA TGCCCGCACA CGTAAGGGCA AGAAGAAGAC TGTTGCTAAT
AAGAAGAAAG CTACTAAATA A
|
|---|
| Protein sequence | MAIRIVGVDL PQNKRGFIAL TYIYGIGRSS AITILDKAGV DRDIKVKDWS DDQAAAIRDV
IGAGYKVEGD LRSEVQLNIK RLMDIGCYRG IRHRIGLPLR GQSTKNNART RKGKKKTVAN
KKKATK
|
|---|
| |