| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1911 |
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| Symbol | rpoA |
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| ID | 2551615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 2010860 |
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| End bp | 2011852 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637150503 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | NP_905993 |
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| Protein GI | 34541514 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAATAT TAGCATTTCA GAAACCCGAA AATGTATTGA TGATGGAGAC GTCGGACTCG
ATCGCCAAGT TCGAGTTCAA ACCTTTGGAG CCCGGTTATG GTATTACCAT TGGCAATGCG
CTTCGTCGAA TACTCTTGTC TTCGCTTGAA GGTTTTGCGA TTACTGCAAT CAAGATTGAA
GGTGTAGAGC ATGAATTTGC TACTATTCCG GGTGTATTGG AGGACGTTAC TAATATTATC
CTCAATCTCA AACAAGTTCG TTTTAAGCAG ATTGTTCCTA ATGCCGATGT AGAGAAAGCT
ACAATTGTTA TCTCTAATTC GGAGGTGTTC CGTGCCGGTG ATTTGAATGC ACAACTTTCA
AACTTTGAAG TGTTGAATTC GAATCTTGTC ATTTGCCACC TCGATAAGTC GGCTACGCTT
ACTATGGAGT TTTCCATAAA TAAGGGGCGT GGCTATGTGT CGGCAGAAGA GAATCGCGCA
GAGCATAATG AGCTTTCCAC GATAGCGATC GACTCAATCT ATACGCCTAT TCGGAATGTC
AAGTATGCGG TAGAGAATTT CCGCGTAGAA CAGAAGACTG ATTACGAAAA GCTCCTGATG
GAAGTGACCA CAGATGGTTC GATCCGTCCT GTAGATGCTC TTCGTGAAGC AGCTCAAATC
TTGATATCCC ACTTCTCTCT GTTTGCAGAG AATAAGATAG CGATAGAGTA TGTGGATATA
GTCGATACTG ATGAGTTCGA TGAAGATTCT CTGCATATGC GTCAACTATT GAAGTCAAAG
CTTTCAGGTC TTGACCTGTC TGTTCGTGCC CTCAATTGTC TGAATGCAGC CGGAGTAGAT
ACGTTGGGCG ATTTAGTGAG TCTGTCACGG AGCGATCTGA TGAAGATTCG CAACTTCGGA
AAGAAGTCTT TGACTGAGCT TGACGAACTG CTGGCAACGC TGAATTTGTC GTTTGGGATG
GATATCAGTA AGTATAAATT AGATAAAGAC TAA
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| Protein sequence | MAILAFQKPE NVLMMETSDS IAKFEFKPLE PGYGITIGNA LRRILLSSLE GFAITAIKIE
GVEHEFATIP GVLEDVTNII LNLKQVRFKQ IVPNADVEKA TIVISNSEVF RAGDLNAQLS
NFEVLNSNLV ICHLDKSATL TMEFSINKGR GYVSAEENRA EHNELSTIAI DSIYTPIRNV
KYAVENFRVE QKTDYEKLLM EVTTDGSIRP VDALREAAQI LISHFSLFAE NKIAIEYVDI
VDTDEFDEDS LHMRQLLKSK LSGLDLSVRA LNCLNAAGVD TLGDLVSLSR SDLMKIRNFG
KKSLTELDEL LATLNLSFGM DISKYKLDKD
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