| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1808 |
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| Symbol | spoT |
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| ID | 2552271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 1903045 |
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| End bp | 1905333 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637150416 |
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| Product | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase |
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| Protein accession | NP_905907 |
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| Protein GI | 34541428 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCAAG ACGCGAGTGC AAAGAATCCC GATATAGAGA CAGAAAATAA GGGGGCGATC
AGCGAAGAGG AAGCTTTGAT TCAGAGGGAA TACTCTTTGT TGATTCAAGA CTATTTGAAT
TCCAACCATC GTCGCAAAGT GGAAAAGATC GACAAGGCTT TCCACTTGGC CAAGGATGCT
CATGCCGGTG CCAAGCGACG TAGCGGTGAG CCGTATATTC TCCATCCTAT TGCCGTGGCA
CGGATTGTGT GCCAGGAAAT AGGCTTGGGA TCTACGTCCA TCTGTTGTGC TCTGCTGCAC
GATGTGGTGG AGGATACGGA GTACACCGTG GAAGATATGC GCGATATGTT CGGCGACAAG
GTCGCTCAGA TCGTGGACGG GCTGACCAAA ATATCCGGCG AGGTATTCAG CAATAGTTCC
GCCCAAGCCG AAAATTTCCG CAAGCTTATC CTGACGATGA ATGATGACAT CCGCGTTATC
CTCATCAAGA TTGCCGATCG CTTGCATAAT ATGCGCACAC TGGACTCCAT GCTTCCGGCC
AAGCAAATGA AGATAGCAGG TGAGACACAG TATGTCTATG CTCCCTTGGC ACATCGTTTG
GGTCTCTTCG CCATCAAGAG CGAGTTGGAA GATTTGAGCT TCAAATACGA GCATCCACAG
GAATATGAAG CCATCAAGGA GAAAATCCGC ATCACCGAGC AGCATCGTTT AGAGATGTTC
GAGCATTTTG CGGCACCGCT CAAACAACGG TTTGCCGGTA TGGACATGTC CTATGAGATG
AAGGCGAGGG TCAAATCCGT CTATTCCATT TGGAAGAAAA TGGAAAAGAA AGGAGTTCCT
TTCGAAGAGA TTTACGACCT TTTTGCGGTA CGAATCATAT TCGAATCTTC ACCCACCATC
CCCGACAAAA ACCGCTGCTG GGAGATCTAT TCGGCCATCA CGGATATATA TCGCAATCGT
CCCGACCGTA TTCGCGACTG GGTCAGCAAT CCTAAAAGCA ACGGATACCA AGCACTCCAC
CTGACGGTCA TGGGACCGGA TGGCGAGTGG GTAGAAGTCC AAATCCGTAG CCGAAGGATG
GACGACATAG CAGAGAAAGG ATTTGCTGCC CACTGGAAAT ACAAGGGAGA CAACGTGGAG
GAAGATTCGG AGCTGGAGAA ATGGCTCAGT ACCATACAGG AGATACTGGA AAATCCGAAT
CCGAATGCTC TTGATTTTCT CGATACGATC AAACTGAATC TATTCTCCAA TGAGGTAATG
GTGTTCACGC CAAAAGGCGA AATTAAACGT TTGCCTCAGG GAGCTACGGC TTTGGACTTT
GCTTATTCGC TTCACTCTGA TTTGGGAGAC CATTGCATCG GGGCCAAAGT GAATCACAAA
CTCGTTCCGC TCAGTTATGT GCTCAACAGC GGTGATCAGG TGGAGGTACT TTCGAGCAAA
AGCCAGCAAC CGACCGAAGA GTGGTTGCGC TATGTGACTA CGGCACGAGC CAAATCGAAA
GTAGATACTT TTCTCCGACG CAAAAGACGG GAGCTGATCA ATCGTGGGGA AGAACGAGTG
GTCAGTGTTA TACGGACATC CGAATCCATG GTCTCTGCCG AGCTTTTGGA TAGGATCGCA
GCCTATTTCG GTTTCCTCAA TCGCGAAACA TTCTTCTACG CCGTCGGTAC GGGTACGGTA
TCTCTGCCCG AAAGCTTCAA AAAACTGCTT CAGGGAGAAC ATAGCGGTAA CTTTCTGATG
AGGGCTATCC GTTCGGCATT GAAAGCGGGC AAAAGCAACA AAACCTCCTC TCCATCCGGT
AAGCCCGCAG AGAAAGAGGA TAAGAAAGCT TACAACACCA AAAAGACTTA TATCCTACAA
GAGGACGAAT TCTCCCGTAA CTATCAGATT GCCGAATGCT GCAAACCGAT TCCGGGCGAC
GATGCTTTCG GATTTATCAA CGACGATAAT ACTGTGGTCG TACACAAGCG ATCTTGCCCC
ATTGCCATGC GTTTGAAAAG CAGCTTTGGC AACCGCATCC TCTCTACCGA ATGGAGCTTG
CACAGTCGTA CCTCGTTCGA AGCTAAGCTC GCACTCAAGG GCATTGACTC CACCGGTATC
CTCACCGCTG TGACACAGGT TATTTCGGAA GATTTCAATG TCGGCATCAA GCACATACAG
CTTACGGCCA AAGATGGCAT TTTCGAGGGA CAAATCCATC TGCTTGTGCA CAGCTCCGAC
GACCTCCTGA AGATCTGTCA TCAGCTTCGT CAGAATAAAT ACATCCAGTC TGTCGGACGC
ATATCATAA
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| Protein sequence | MEQDASAKNP DIETENKGAI SEEEALIQRE YSLLIQDYLN SNHRRKVEKI DKAFHLAKDA
HAGAKRRSGE PYILHPIAVA RIVCQEIGLG STSICCALLH DVVEDTEYTV EDMRDMFGDK
VAQIVDGLTK ISGEVFSNSS AQAENFRKLI LTMNDDIRVI LIKIADRLHN MRTLDSMLPA
KQMKIAGETQ YVYAPLAHRL GLFAIKSELE DLSFKYEHPQ EYEAIKEKIR ITEQHRLEMF
EHFAAPLKQR FAGMDMSYEM KARVKSVYSI WKKMEKKGVP FEEIYDLFAV RIIFESSPTI
PDKNRCWEIY SAITDIYRNR PDRIRDWVSN PKSNGYQALH LTVMGPDGEW VEVQIRSRRM
DDIAEKGFAA HWKYKGDNVE EDSELEKWLS TIQEILENPN PNALDFLDTI KLNLFSNEVM
VFTPKGEIKR LPQGATALDF AYSLHSDLGD HCIGAKVNHK LVPLSYVLNS GDQVEVLSSK
SQQPTEEWLR YVTTARAKSK VDTFLRRKRR ELINRGEERV VSVIRTSESM VSAELLDRIA
AYFGFLNRET FFYAVGTGTV SLPESFKKLL QGEHSGNFLM RAIRSALKAG KSNKTSSPSG
KPAEKEDKKA YNTKKTYILQ EDEFSRNYQI AECCKPIPGD DAFGFINDDN TVVVHKRSCP
IAMRLKSSFG NRILSTEWSL HSRTSFEAKL ALKGIDSTGI LTAVTQVISE DFNVGIKHIQ
LTAKDGIFEG QIHLLVHSSD DLLKICHQLR QNKYIQSVGR IS
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