Gene PG1805 details

Gene Information

• Locus tag: PG1805
• Symbol: atpD
• ID: 2552285
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 1899729
• End bp: 1900343
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637150413
• Product: V-type ATP synthase subunit D
• Protein accession: NP_905904
• Protein GI: 34541425
• COG category: [C] Energy production and conversion
• COG ID: [COG1394] Archaeal/vacuolar-type H+-ATPase subunit D
• TIGRFAM ID: [TIGR00309] H(+)-transporting ATP synthase, vacuolar type, subunit D

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTATTA AGTTTCAATA CAACAAAACC TCACTTCAGC AGCAAGAAAA GCAGCTTAAG 
ATGCGAGAGC GTACCTTACC GACGATCAAA AGCAAGGAGA GCGCATTGCG TCTGGAGGTG 
AAGCGAACGA AGGACGAGGT GGAGCGATTG GAACGCCAAC TGGAAGAAGA GATCGTAGGC 
TACCGAAGCA TGGTAAGCCT GTGGAACGAA TTCAAACCCG ACCTGATCAG TGTGGAGGGT 
GTCAAGCTCT CGGCAAAGAA GGTGGCAGGC GTAGTCGTTC CCGTACTCGA TGACATTTCT 
TACACGATCA AGCCTTTCAG TTTGTTCAAT GCCCCGTCAT GGTTTGCCGA AGGCATTGAC 
CTGCTGAAGA ACTTGGCCCA TACCGGAATC GAGGCCGAGT TCCTCGGTCT GAAGTTGGAG 
TTCCTCGAAT ATGCACGCAA GAAGACTACA CAGAAAGTGA ATCTTTTTGA GAAAGTGCAA 
ATCCCCGGCT ACAAAGACGC CATACGCAAG ATCAAACGCT ATCTGGAGGA TGAAGAGAGT 
TTGTCCAAAT CCTCTCAGAA GATTATGCGA GCCAATATGG AGAAACGTAA CAAAGGAGAG 
GAGGTGATGG CATGA 

 

Protein sequence

MAIKFQYNKT SLQQQEKQLK MRERTLPTIK SKESALRLEV KRTKDEVERL ERQLEEEIVG 
YRSMVSLWNE FKPDLISVEG VKLSAKKVAG VVVPVLDDIS YTIKPFSLFN APSWFAEGID 
LLKNLAHTGI EAEFLGLKLE FLEYARKKTT QKVNLFEKVQ IPGYKDAIRK IKRYLEDEES 
LSKSSQKIMR ANMEKRNKGE EVMA