Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1784 |
Symbol | |
ID | 2551443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 1872706 |
End bp | 1873500 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637150393 |
Product | hypothetical protein |
Protein accession | NP_905886 |
Protein GI | 34541407 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTCTCT TGAGTTTCGA TATCGAGGAG TTCGATGTAC CCCTTGAGCA GGGATATAAG GACTTCCCAT CGGAAGAACA ATTGCGCATC AGTCGTCAAG GGACAGAAGC CATCCTCCAT ATATTGAGAA AAAAAGGCGT TCGGTCCACC TTCTTCAGTA CCGTTACTTT CTGGGAATCA TTGCCGGAGG ATCTGCGAAA GGGCATTTAC ACGGATGGAC ACGAATTGGC CTCTCATGGT GTGTTTCACT CTTCTTTCTC CAAAGAGCAC CTTGCCGAAT CTCGTCAGAA GCTCGCTTCT CTGTGGGATG GTACCGATGT CTGCGGTTTT CGGATGCCAC GTATGATGCC CGTTGGCGAT GCGGAAATAG CCGAAGCCGG TTACTTGTAC AATTCTTCGC TCAATCCGAC TTGTATCCCC GGTCGCTACA ATCATCTCTC GGCTCCGAGA TTACCCTATT TCGACAAGTA TGGGGTCTTG CAGATGCCGA GTTCGGTAAC ACCTCTATTG CGTTTCCCTC TCTTTTGGCT TTCCCTCCAC CATCTTCCCC TCAGGCTATA CATCAGGATG ATTCGTCACA CCGTTCGGCG CGACAATTAT CTCAATCTTT ATTTTCACCC TTGGGAGTTC GCTGAGATCA GCTGTTTACC CGACTGCAAA CTGAGCTATA CCGTTACTCA TAACAGTGGC GAAAAAATGT GTCGTAGACT GGAGGCCGTG ATCGACACCC TCCTTGCCGA TGGTTGTTCT TTCGGCACTT TCTCAGATTA CTATCGTTTT CAAAAGCAAG GCTGA
|
Protein sequence | MVLLSFDIEE FDVPLEQGYK DFPSEEQLRI SRQGTEAILH ILRKKGVRST FFSTVTFWES LPEDLRKGIY TDGHELASHG VFHSSFSKEH LAESRQKLAS LWDGTDVCGF RMPRMMPVGD AEIAEAGYLY NSSLNPTCIP GRYNHLSAPR LPYFDKYGVL QMPSSVTPLL RFPLFWLSLH HLPLRLYIRM IRHTVRRDNY LNLYFHPWEF AEISCLPDCK LSYTVTHNSG EKMCRRLEAV IDTLLADGCS FGTFSDYYRF QKQG
|
| |