| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1764 |
|---|
| Symbol | fabF |
|---|
| ID | 2552383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 1851886 |
|---|
| End bp | 1853142 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637150373 |
|---|
| Product | 3-oxoacyl-(acyl-carrier-protein) synthase II |
|---|
| Protein accession | NP_905866 |
|---|
| Protein GI | 34541387 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTGA AAAGAGTAGT AGTAACAGGG TTAGGAGCCA TTACTCCGCT TGGCAACTCT
GCTCCCGAAA CGTGGGAAAG CTTAGTGGCA GGCAAGAGTG GAGCCGGACC TATCACGCTC
TTTGATGCCT CCAAGTTCAA AACGCAGTTC GCCTGCGAAG TGAAGGGTTT TGACCCTTTG
CAACATTTTG ACCGCAAGGA GGTGCGTAAG TTAGACCGCT ACGCGCAACT TGCACAAGTA
GCGGCCGATG AGAGTGTAAA AGACTCCGGC CTCGATTTGG ACCAATTGGA CAAGAATCGT
GTGGGAGTGA TCGTTTCTGC CGGAATCGGT GGTCTGACGA CTTTCGAAAG TGAAGTGCGC
GACTACAATC CGGAGAACGG GCCTCGTTTC AATCCGTTTT TCATCCCCAA GATGATCTCC
GATATTGCAG CCGGCCAGAT CTCGATCAAA TACGGCTTCC ATGGTCCTAA CTATTCCATC
GCATCCGCAT GCGCTTCCTC TACCAATGCT CTGATCGATG CTTGCCATCT GATCCGCTTA
GGCAAAGCCA ATGTAATCAT TGCAGGAGGC TCTGAGGCGT CGATTTGCGC TGCCGGAGTG
GGAGGTTTCA ATGCAATGAA TGCTCTCTCC ACTCGCAACG ATGCTCCACA AGAGGCCAGC
CGCCCCTTCA GTGCCAGTCG TGACGGGTTT GTAATGGGTG AAGGAGCAGC ATGTATAGTT
CTCGAAGAAC TGGAACATGC TCTTAAACGC GGTGCTCGCA TCTATGCCGA ATTGGTGGGA
ACAGGTCTTT CAGCCGATGC ATATCACCTG ACGGCAAGTC ATCCTGACGG GTTGGGAGCC
AAGCTGGTTA TGACAAACGC TATCGAAGAT GCTGGATTGA AGCCGGAGGA TATTGACTAC
GTCAATGTAC ACGGTACTTC TACTCCTGTT GGGGACATTT CAGAGGCAAA AGCTATCAAG
GATGTCTTCG GAGAACATGC TTATAAGCTG AACATCAGTT CTACCAAGAG TATGACAGGA
CATCTTCTCG GAGCTGCCGG AGCTGTAGAA GCTATGGTGT GCGTTAAGTC TGTCCACGAG
GATATCGTTC CGCCTACGAT CAACCATCAG GACGACGATC GCGATCCGGA AATCGATTAT
AACCTGAACT TTACATTCAA CGAAGCACAA AAGCGTCAGG TACGTGTAGC CCTGTCCAAT
ACTTTTGGAT TCGGAGGACA TAATGCCAGC GTTGTATTCA AGAAGTTCGA GAAATAA
|
|---|
| Protein sequence | MELKRVVVTG LGAITPLGNS APETWESLVA GKSGAGPITL FDASKFKTQF ACEVKGFDPL
QHFDRKEVRK LDRYAQLAQV AADESVKDSG LDLDQLDKNR VGVIVSAGIG GLTTFESEVR
DYNPENGPRF NPFFIPKMIS DIAAGQISIK YGFHGPNYSI ASACASSTNA LIDACHLIRL
GKANVIIAGG SEASICAAGV GGFNAMNALS TRNDAPQEAS RPFSASRDGF VMGEGAACIV
LEELEHALKR GARIYAELVG TGLSADAYHL TASHPDGLGA KLVMTNAIED AGLKPEDIDY
VNVHGTSTPV GDISEAKAIK DVFGEHAYKL NISSTKSMTG HLLGAAGAVE AMVCVKSVHE
DIVPPTINHQ DDDRDPEIDY NLNFTFNEAQ KRQVRVALSN TFGFGGHNAS VVFKKFEK
|
|---|
| |