Gene PG1732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG1732 
SymbolxerD 
ID2552438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand
Start bp1820311 
End bp1821237 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content50% 
IMG OID637150347 
Productintegrase/recombinase XerD 
Protein accessionNP_905840 
Protein GI34541361 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02225] tyrosine recombinase XerD 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGAAG ATAGCCTTTC CAAGCGTTAC AAGTCCTACC TCAGTTTGGA GCTTCACCTG 
ACGCCCAACA GTGTGGATGC TTACTTAAAG GATTTGAGCA AGTTAGACTC TTATCTCACG
GCTGAAAACA TCTCTTTTCG AGAGGTTTCG TATGAAAATC TTCAACATTT CGTAGCCGAA
TTGTATGACC TCGGCATCAG TGCGCGCTCG ATAGCGCGTA TCATCAGCGG TGTCAAGAGT
TTCTTCCGCT TCCTCGTTTT GGAAGAGTAT ATCGAAGCGG ATCCTACCGA GTTGCTCGAA
GGCCCTCGCA TCGGTGTCCA TCTGCCTACG GTATTGACCA TCGAAGAAGT TGATCGACTG
ATCGGATCGA TCGATCCGGC AGCTCAGGGA GCCCAACGCA ATCGCGCCAT TCTGGAAATA
CTCTATAGCT GTGGTCTGCG TGTCAGCGAA CTGACTTCTT TGAAATTCAG CAATCTCTTC
CTCAACGAAT CATTTTTGCG TATCGATGGC AAAGGGCGCA AACAGCGTCT TGTACCCATG
AGCGAGACTG CTATCACCGA GCTGAAGCGG TATCTGTCCG ATCCCGAACG CCCGACCCCT
GTTCTTGGAC AAGAGGAGTA TGTGTTTCTG AGCAATCGCG GCAAAGCCAT CTCCCGCATC
ATGGTTTTCG TCATGATCAA GAAGCTGGCA GAAGAAGCCG GTATAACGAA GAGTATCAGC
CCCCATACAT TCCGTCACAG CTTTGCCACC CATCTGCTCG AGGGAGGAGC TAATCTGCAG
GCCATTCAGC TCATGCTTGG CCATGAGAAC ATTGCCACGA CGGAGATCTA TACCCATATC
GACAGAGAAA CACTCCGGCA TGAAATCGAG ACCTACCATC CGCGCAATCA ATCCTATCGT
CGATCCGGTT CCGAAGCTGA CCAATAA
 
Protein sequence
MIEDSLSKRY KSYLSLELHL TPNSVDAYLK DLSKLDSYLT AENISFREVS YENLQHFVAE 
LYDLGISARS IARIISGVKS FFRFLVLEEY IEADPTELLE GPRIGVHLPT VLTIEEVDRL
IGSIDPAAQG AQRNRAILEI LYSCGLRVSE LTSLKFSNLF LNESFLRIDG KGRKQRLVPM
SETAITELKR YLSDPERPTP VLGQEEYVFL SNRGKAISRI MVFVMIKKLA EEAGITKSIS
PHTFRHSFAT HLLEGGANLQ AIQLMLGHEN IATTEIYTHI DRETLRHEIE TYHPRNQSYR
RSGSEADQ