| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1719 |
|---|
| Symbol | |
|---|
| ID | 2552497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | + |
|---|
| Start bp | 1806889 |
|---|
| End bp | 1808739 |
|---|
| Gene Length | 1851 bp |
|---|
| Protein Length | 616 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637150332 |
|---|
| Product | ABC transporter ATP-binding protein |
|---|
| Protein accession | NP_905827 |
|---|
| Protein GI | 34541348 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCATT TTTTCAGTGC TATACGCCGT TTCGTGCCAC CCTATAAGAA GTATGTGGCA
TGGAGCGTGG TGGCCAATAC GCTGAGTGCA CTGCTCAACC TATTGTCTTT CTCTCTGATC
ATGCCCATCC TGCGTATCCT CTTCAGGATA GACCGGCAGG TGACCACTTA CATGCCGATG
GATGGTATAG ACTGGGGTAG CATGGATGGC TGGAAAGCTG CCGGAGCCGC TCTGAGCAAT
AATTTCAGCT GGTACGTAAG CCAACTTATA GAGGTACGTG GAGCATCGTT TACGCTTATC
ATGCTGGGGA TTTATCTGGT GGTGATGACC TTTCTGAAAG TGGCTTCGAT GTACCTCGGA
TTCTACAGCA TGATTCCGCT GCGCACGGGA GTGGTGCGGG ACATTCGCAA TCAGATCAAC
GATAAGATCC TCGGACTCCC CCTTTCCTTT TTCAGCGAAG AGCGCAAGGG CGATATCATG
GCACGCATTT CGGGGGATGT GAATGAGATA GAGACTTCGG TCATCAGTTC GCTGGATATG
TTGCTGAAAA ATCCGATCCT CATTTCCATC TACCTGATCG GGATGATCCT CATCAGCTGG
CAGCTCACCC TTTTCGTCTT CATCCTCCTA CCGATAGCCG GAGGGCTGAT GGGTAAGGTG
GGCAAAACTC TCAAGCGCAA GAGTCTGGAA GGGCAGAATC AGTGGGGAAG CCTGATGAGC
CAGATAGAAG AAACGCTTGG CGGCCTGCGT ATCATCAAGG CATTCAATGC CGAGAAAAAG
ATGCAGGATC GGTTCCATCG TGCCAACGAG CAGTTTCGCC GTACGACGAT GAAGGTCTTC
CGCCGCCAGC AGTTGGCACA TCCGATGAGC GAATTTCTCG GCACAGCTAC CATAGCCATC
GTACTGTGGT ATGGGGGTAC CCTTATCCTG AACAATACGA GCGAGATCGA TGCTTCCACC
TTTATATATT ATCTGGTGAT CTTCTACAGT CTGATCAATC CGGTCAAGGA GCTGAGCAAG
GCATCCTACG CCATTGAAAA GGGGTTGGCC TCCATGTCGC GCGTGGACAA GATCCTGATG
GCCGAGAACG ACATCAAAGA TCCCGAACAG CCCCACCCCG TGGTGTTCGA AGAGGAGGTC
GTTTACGACC ATGTGTGGTT CCGCTACGGC GAAGACTGGG TGCTGCGCGA TGTCTGTCTG
ACAATCCCGA AGGGCAAGAC GGTGGCATTG GTCGGTCAGA GCGGATCGGG CAAGAGTACG
ATCGTGGATC TGCTACCACG GTTCTACGAC CTCCAGCAAG GCCGTGTGCT GCTAGACGGG
ACGGATGTGC GGGATGTAAA ACTACACGAG TTGCGTGAGC TGATCGGCAA CGTCAATCAG
GAAGCAATCC TCTTCAACGA TACCGTCTTC AACAACATCG CTTTCGGCAA AGAGAATGCC
ACGGCCGAAG AGGTGGAGCA TGCAGCACGC ATAGCCAATG CGCACGACTT CATCATGCAG
ATGCCCGAGG GTTATCAGTC CAACATCGGC GACCGTGGAG GCAAGCTGTC GGGAGGCCAG
CGGCAACGGA TCAGTATTGC ACGAGCCATT TTGAAGAATC CGCCGATTTT GATTCTGGAT
GAAGCCACGT CAGCACTCGA CACGGAAAGT GAACGTTTGG TACAGAATGC CATTGAGAAA
CTGATGGCCA ATAGAACAGC TATCGTCATA GCGCACCGAC TGACCACGAT CCGCAATGCG
GATATTATAT GCGTACTGCA TGAGGGGCGT ATCGTGGAGC AAGGACGCCA CGATGAACTG
TATGCCCTGG GAGGATACTA CACGAAGCTA TGCGATATGA ACGCAGAATG A
|
|---|
| Protein sequence | MKHFFSAIRR FVPPYKKYVA WSVVANTLSA LLNLLSFSLI MPILRILFRI DRQVTTYMPM
DGIDWGSMDG WKAAGAALSN NFSWYVSQLI EVRGASFTLI MLGIYLVVMT FLKVASMYLG
FYSMIPLRTG VVRDIRNQIN DKILGLPLSF FSEERKGDIM ARISGDVNEI ETSVISSLDM
LLKNPILISI YLIGMILISW QLTLFVFILL PIAGGLMGKV GKTLKRKSLE GQNQWGSLMS
QIEETLGGLR IIKAFNAEKK MQDRFHRANE QFRRTTMKVF RRQQLAHPMS EFLGTATIAI
VLWYGGTLIL NNTSEIDAST FIYYLVIFYS LINPVKELSK ASYAIEKGLA SMSRVDKILM
AENDIKDPEQ PHPVVFEEEV VYDHVWFRYG EDWVLRDVCL TIPKGKTVAL VGQSGSGKST
IVDLLPRFYD LQQGRVLLDG TDVRDVKLHE LRELIGNVNQ EAILFNDTVF NNIAFGKENA
TAEEVEHAAR IANAHDFIMQ MPEGYQSNIG DRGGKLSGGQ RQRISIARAI LKNPPILILD
EATSALDTES ERLVQNAIEK LMANRTAIVI AHRLTTIRNA DIICVLHEGR IVEQGRHDEL
YALGGYYTKL CDMNAE
|
|---|
| |