Gene PG1702 details

Gene Information

• Locus tag: PG1702
• Symbol: gyrB
• ID: 2552582
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 1788036
• End bp: 1790000
• Gene Length: 1965 bp
• Protein Length: 654 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637150319
• Product: DNA gyrase, B subunit
• Protein accession: NP_905814
• Protein GI: 34541335
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.118209
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACGAAG ACATTAAAAA GAATACCTCG GCATCGGAAT ATTCGGCCAG CAATATCCAA 
GTATTGGAAG GTCTGGAAGC TGTCCGCAAG CGACCGGCCA TGTATATAGG TGACATCAGC 
GAAAAGGGAT TGCACCATTT GGTCTATGAG GTTGTAGACA ACTCGATAGA CGAAGCTTTG 
GCCGGATACT GTGACAATGT AGAGGTAATC ATAGAAGAAG ATAACTCCAT TACGGTTCGT 
GACAATGGTC GCGGTATTCC GGTGGACTAT CACGAGAAAG AAGGTAAGAG TGCTCTCGAA 
GTGGTTTTGA CCGTATTGCA TGCCGGAGGT AAGTTTGACA AGGGTTCATA CAAAGTCTCG 
GGCGGTTTGC ATGGAGTGGG CGTTTCTTGT GTGAATGCAC TTTCCACATA TTTGCGTGCA 
GAGGTGTATC GTAATGGGAA GATCCATATG CAGGAGTTCA GCTGTGGCAA ACCCTTGCAT 
GATGTGGAGG TGATAGGCTC CACGGAGCGT ACGGGGACGA CTATTCAGTT CAAACCGGAT 
AGCTCTATCT TCTCTGTTAC GGAATACCAA TACTCCATAC TGGCCAAGCG TCTCCGCGAA 
CTTTCTTATC TGAATGCGGG GATTACACTT ACGCTGACGG ATAAACGAAC GCTCAAGGAA 
GACGGCAGTG GCTACAAGCA AGATGTATTC CGTTCGGAAG AAGGATTGAA GGAGTTTGTC 
CGTCATCTTG ACCGTATGAA AGAACCGCTG GTGGACAACG TTATCCATAT CGTCACCGAG 
AAGCAGGGCA TTCCCGTGGA GGTAGCCATG ACGTATAATA CTTCCTATCT GGAGAATGTA 
TATAGCTACG TCAATGACAT CAATACGATC GAGGGCGGTA CGCATTTGGC CGGATTCCGT 
CGTGGACTTA CTCGAACTTT GAAGAAATAT GCCACAGACT CCAAACTCCT GGATAAGGTG 
AAGGTGGAGA TCACCGGCGA CGACTTCCGC GAGGGATTGA CTGCCGTGAT CAGCATCAAA 
GTGGCCGAAC CTCAGTTCGA AGGACAGACC AAGACCAAGC TCGGTAACAA TGAAGTGACC 
GGTGCTGTCG ATATGGCTGT AAGCGAAGCA CTCGAATACT ATCTGGAGGA GCATCCGAAA 
GAAGCCAAAC TGATCGTGGA CAAAGTCGTT TTGGCGGCAA CTGCTCGTCA GGCAGCCCGT 
AAGGCCCGCG AAATGGTGCA GCGCAAATCG CCCTTGTCCG GTGGAGGATT GCCGGGTAAG 
CTTGCCGACT GCTCGTCCAA AGACCCGGAG CAGTGCGAAC TCTTCCTTGT CGAGGGTGAT 
TCGGCCGGCG GAACGGCCAA GCAGGGGCGC GACCGCGAGT TTCAGGCTAT CCTGCCACTG 
AGGGGAAAGA TCCTCAATGT GGAGAAAGCC ATGCAACACA AGGTATTCGA AAGCGAAGAA 
ATCCGCAACA TATATACCGC TTTGGGTGTG ACGATCGGAA CGGAAGAGGA CAGCAAAGCC 
CTTAACCTTT CCAAACTTCG CTATCATAAA GTGGTGATCA TGACCGATGC CGATGTGGAC 
GGTAGCCATA TCGCTACGCT TATCCTTACG TTCTTCTTCA GGAATATGCG TACGCTCATA 
GAAAACGGTT ATGTCTTCAT CGCTACTCCT CCTCTCTACC TTTGCAAGAA GGGGAAAGAG 
CAAGAGTATT GCTGGACAGA GCAGCAGCGT CAAGCGTTTG TCGACCGTTA TGCCGATGGT 
AATGAAAGCC GTGTGCATGT ACAGCGTTAC AAGGGCCTTG GTGAGATGAA CGAGGAGCAG 
CTTTGGGAGA CGACGATGGA TCCGGAGAAG AGGACGCTTC GTAAGGTGAC GATCGAGAAT 
GCTGCTGAGG CAGATGCCAT ATTCTCCATG CTCATGGGAG ACGAGGTAGG TCCGCGCAGG 
GAGTTTATAG AAGAAAATGC TACTTATGCA AGAATAGATG CTTAG 

 

Protein sequence

MNEDIKKNTS ASEYSASNIQ VLEGLEAVRK RPAMYIGDIS EKGLHHLVYE VVDNSIDEAL 
AGYCDNVEVI IEEDNSITVR DNGRGIPVDY HEKEGKSALE VVLTVLHAGG KFDKGSYKVS 
GGLHGVGVSC VNALSTYLRA EVYRNGKIHM QEFSCGKPLH DVEVIGSTER TGTTIQFKPD 
SSIFSVTEYQ YSILAKRLRE LSYLNAGITL TLTDKRTLKE DGSGYKQDVF RSEEGLKEFV 
RHLDRMKEPL VDNVIHIVTE KQGIPVEVAM TYNTSYLENV YSYVNDINTI EGGTHLAGFR 
RGLTRTLKKY ATDSKLLDKV KVEITGDDFR EGLTAVISIK VAEPQFEGQT KTKLGNNEVT 
GAVDMAVSEA LEYYLEEHPK EAKLIVDKVV LAATARQAAR KAREMVQRKS PLSGGGLPGK 
LADCSSKDPE QCELFLVEGD SAGGTAKQGR DREFQAILPL RGKILNVEKA MQHKVFESEE 
IRNIYTALGV TIGTEEDSKA LNLSKLRYHK VVIMTDADVD GSHIATLILT FFFRNMRTLI 
ENGYVFIATP PLYLCKKGKE QEYCWTEQQR QAFVDRYADG NESRVHVQRY KGLGEMNEEQ 
LWETTMDPEK RTLRKVTIEN AAEADAIFSM LMGDEVGPRR EFIEENATYA RIDA