Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1660 |
Symbol | |
ID | 2552666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 1743834 |
End bp | 1744358 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637150280 |
Product | ECF subfamily RNA polymerase sigma factor |
Protein accession | NP_905780 |
Protein GI | 34541301 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.379101 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAAGC AATCCGACAG CTACTATATC AGTGCCGTGC AGGCGGGCGA TACCGAAAGT TTCGCCCCTT TGGTGGAGCG ATACAGCGAC ATGCTGTATG CTCTCCTCTG TCGGCTGCTA CAGGACGAAG AGGATGCGGC CGATCTGCTG CAAGACACCT TCGTAAAGGC TTTCAGGCAT ATCAGCCGAT TCGACGGTCG GAGTTCGTTC TCCACATGGA TCTACCGAAT CGCCTATAAT GAGGCGATAG ACCATCTTCG TCGCCACAAG GCCTATGTAA CCGATCGGGT AGAGGAGCTA CCCGATGTGC CGGACGAAGA TCTCGAACCG TCCGGAGAGG ATCCGGAGCT GCTGCAGCAA GCATTGGATT CGCTGCCGGC TGCCGACAAA GCCTTGCTGC TCATGTTCTA TTCGGATGAC TTGTCGGTTC GGGATATAGC GGAAGTGACC GGTATGTCGG AGTCCAACGT GAAGGTCAAG CTCCACCGAC TTCGCACCAA ACTCTATAAA ATGATGAGAA AATGA
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Protein sequence | MEKQSDSYYI SAVQAGDTES FAPLVERYSD MLYALLCRLL QDEEDAADLL QDTFVKAFRH ISRFDGRSSF STWIYRIAYN EAIDHLRRHK AYVTDRVEEL PDVPDEDLEP SGEDPELLQQ ALDSLPAADK ALLLMFYSDD LSVRDIAEVT GMSESNVKVK LHRLRTKLYK MMRK
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