| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1660 |
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| Symbol | |
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| ID | 2552666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 1743834 |
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| End bp | 1744358 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637150280 |
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| Product | ECF subfamily RNA polymerase sigma factor |
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| Protein accession | NP_905780 |
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| Protein GI | 34541301 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.379101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAAGC AATCCGACAG CTACTATATC AGTGCCGTGC AGGCGGGCGA TACCGAAAGT
TTCGCCCCTT TGGTGGAGCG ATACAGCGAC ATGCTGTATG CTCTCCTCTG TCGGCTGCTA
CAGGACGAAG AGGATGCGGC CGATCTGCTG CAAGACACCT TCGTAAAGGC TTTCAGGCAT
ATCAGCCGAT TCGACGGTCG GAGTTCGTTC TCCACATGGA TCTACCGAAT CGCCTATAAT
GAGGCGATAG ACCATCTTCG TCGCCACAAG GCCTATGTAA CCGATCGGGT AGAGGAGCTA
CCCGATGTGC CGGACGAAGA TCTCGAACCG TCCGGAGAGG ATCCGGAGCT GCTGCAGCAA
GCATTGGATT CGCTGCCGGC TGCCGACAAA GCCTTGCTGC TCATGTTCTA TTCGGATGAC
TTGTCGGTTC GGGATATAGC GGAAGTGACC GGTATGTCGG AGTCCAACGT GAAGGTCAAG
CTCCACCGAC TTCGCACCAA ACTCTATAAA ATGATGAGAA AATGA
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| Protein sequence | MEKQSDSYYI SAVQAGDTES FAPLVERYSD MLYALLCRLL QDEEDAADLL QDTFVKAFRH
ISRFDGRSSF STWIYRIAYN EAIDHLRRHK AYVTDRVEEL PDVPDEDLEP SGEDPELLQQ
ALDSLPAADK ALLLMFYSDD LSVRDIAEVT GMSESNVKVK LHRLRTKLYK MMRK
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