Gene PG1654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG1654 
Symbol 
ID2552723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand+ 
Start bp1736598 
End bp1737221 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content54% 
IMG OID637150274 
ProductD-alanyl-D-alanine dipeptidase 
Protein accessionNP_905774 
Protein GI34541295 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2173] D-alanyl-D-alanine dipeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.52906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTGTG CGCAGACTTT CTCTGAAGAA GATTTCCGCA TACGAGGCTA CGTCGATATT 
CACCGTCTCG ACACTACGAT TCGTCTCGCT CTCATTTATT CCACGACGGA CAACTTCGTG 
GGCGAAGATA TGTACGGCGA CTTCGATAAA GCCTATTTCG AAAAGGGCTT TGCCGAACGC 
ATCCATCAAG CGCAGCGACT GCTACGCAAA GAACACCCGG ACTATTCTCT ACTCATCTAC 
GACGCATCCC GTCCCATCAG CATACAGAGG CGTATGTACA CCCTCGTGAA GGGAACTTCC 
AAGGCTGTCT ATGTAGCCAA CGGAAACAGA GGAGGGAAGC ATAACTACGG AGTCGCTGTA 
GATCTTACCA TCGTGGATCG TGATGGAAAA CCGTTGGATA TGGGCACTCC TGTCGATCAC 
TTTGGCCGAG CGGCACATGT GGGTCAGGAA GAACGCTTGG CCGCAGACGG CCTGATCAGC 
CGAGAGGCTG TCCGGAACCG CCGGTTGCTA CGTCGCATAA TGAAGTCGGT CGGGCTGGTA 
CCCTATCGCA GGGAGTGGTG GCATTACGAA CTGCCGGAGA GCATGAGCCA CACCCGCTCA 
CATTATCGCT TGCTCGACTT TTAA
 
Protein sequence
MLCAQTFSEE DFRIRGYVDI HRLDTTIRLA LIYSTTDNFV GEDMYGDFDK AYFEKGFAER 
IHQAQRLLRK EHPDYSLLIY DASRPISIQR RMYTLVKGTS KAVYVANGNR GGKHNYGVAV 
DLTIVDRDGK PLDMGTPVDH FGRAAHVGQE ERLAADGLIS REAVRNRRLL RRIMKSVGLV 
PYRREWWHYE LPESMSHTRS HYRLLDF