Gene PG1615 details

Gene Information

• Locus tag: PG1615
• Symbol: sdhA
• ID: 2552827
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 1694674
• End bp: 1696617
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637150244
• Product: succinate dehydrogenase flavoprotein subunit
• Protein accession: NP_905744
• Protein GI: 34541265
• COG category: [C] Energy production and conversion
• COG ID: [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
• TIGRFAM ID: [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 23
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTACAA TAAATTCCAA AATACCCGCC GGCCCGCTGA AAGACAAGTG GACCAACTAT 
AAGGATCATC AGAAGCTGGT GAACCCGGCC AACAAACGTC GTCTGGATAT TATCGTGGTC 
GGTACCGGCC TGGCCGGTGC TTCGGCTGCT GCTTCTTTCG GCGAGATGGG CTTCAATGTG 
CTTAACTTCT GCATACAGGA TTCTCCTCGC CGTGCGCACT CCATCGCTGC ACAGGGAGGT 
ATCAATGCCG CCAAGAACTA CCAGAACGAC GGCGACTCCG TTTATCGACT CTTCTACGAT 
ACGATCAAAG GAGGTGACTA TCGTGCTCGC GAGGCCAACG TATATCGTCT GGCCGAAGTG 
TCCAATGCCA TTATAGACCA GTGTGTGGCT CAGGGTGTAC CCTTTGCTCG CGAATACGGT 
GGCCTACTGG ACAACCGTTC TTTCGGTGGA GCGCAGGTAT CTCGTACTTT CTATGCTCGT 
GGTCAGACGG GACAGCAGTT GCTCCTCGGA GCCTATTCGG CTCTCTCCCG TCAGGTCGGT 
TTGGGTAAGG TGAAGCTTTA TACTCGCTAC GAGATGCTCG ACGTGGTGCT TATCGACGGT 
CGTGCTCGCG GTATTCTGGC TCGCAATTTG GTGACGGGCA AGATCGAACG CTTTGCAGCA 
CATGCCGTGG TAATTGCCAC GGGTGGTTAT GGCAATGCCT TCTTCCTTTC TACCAATGCA 
ATGGCATCTA ACGGCTCTGC CGCATGGCAG TGCTATAAGA AAGGTGCTTT CTTCGCCAAT 
CCATGTATGG CTCAGATCCA TCCCACTTGT ATTCCCGTAC ACGGGGACTA CCAGTCCAAG 
CTGACACTCA TGTCCGAGTC ACTCCGTAAT GACGGTCGTA TCTGGGTGCC TAAAGACATA 
GAGGATGCCG GACGTCTTCA GCGCGGTGAG ATCAAAGGAA AAGACATTCC CGAAGAGAAG 
CGCGACTACT ATCTGGAGCG TCGCTATCCG GCCTTCGGCA ACCTGGTGCC TCGTGATGTG 
GCCAGCCGTG CTGCCAAAGA ACGTTGCGAT GCCGGTTATG GTGTGAACAA TACGGGCCTT 
GCCGTATTCC TCGACTTCGG CGATGCCATC AAACGTTTGG GACGCGACGT GGTGGAGCAG 
AAGTACGGCA ACCTCTTCCA GATGTATGAG AAGATCGCAG ATGAGAATCC GTACGAAACG 
CCGATGATGA TCTATCCGGC TATCCACTAT ACGATGGGTG GTCTCTGGGT GGATTACGAG 
CTGATGACTA CCATCCCGGG CCTGTTTGCC ATCGGAGAAG CCAACTTCTC TGATCACGGA 
GCCAACCGTC TCGGTGCTTC TGCTCTCATG CAGGGTCTGG CTGACGGTTA CTTCGTTATT 
CCTTATACGA TGCAGAACTA TCTGGCCGAT CAGATTCAGG TGCCGCGCTT CAGCACGGAT 
CGTCCCGAAT TCGAAGCTGC CGAGAAAGAG TTGCAAGACC GCATAACCCG TATCATGAAT 
GTCAAAGGCA ATAAGTCCGT GGACGACCTT CACAAGGAGC TGGGCCACAT CATGTGGGAC 
AATGTGGGAA TGGGACGAGA CAAAGCCGGT TTGGAAAAAG CCATTGTGAA GCTGGACGAG 
CTGAAGAAAG AGTTCTGGAG CAATGTCTAT GTGCCGGGTG AAGCCAATGA CCTTAACGTA 
GAGCTGGAGA AAGCCCTCCG ATTGGCGGAC TTCATCGAGA TAGGTACGCT GATGGCGCAC 
GATGCCATGG ACCGCGAAGA AAGTTGTGGC GGTCATTTCC GTATCGAGCA CCAGACAGAA 
GAGGGTGAAG CCAAACGTGA CGATGAGAAC TTCGCTTACG TTTCCTGTTG GGAATATCAG 
GGAGAAGACA AGGATCCGGT CATGTACAAG GAAGAACTGG TATATGAAGA GACTGTCCGT 
GCACAACGTA ACTACAAGAG CTAA 

 

Protein sequence

MATINSKIPA GPLKDKWTNY KDHQKLVNPA NKRRLDIIVV GTGLAGASAA ASFGEMGFNV 
LNFCIQDSPR RAHSIAAQGG INAAKNYQND GDSVYRLFYD TIKGGDYRAR EANVYRLAEV 
SNAIIDQCVA QGVPFAREYG GLLDNRSFGG AQVSRTFYAR GQTGQQLLLG AYSALSRQVG 
LGKVKLYTRY EMLDVVLIDG RARGILARNL VTGKIERFAA HAVVIATGGY GNAFFLSTNA 
MASNGSAAWQ CYKKGAFFAN PCMAQIHPTC IPVHGDYQSK LTLMSESLRN DGRIWVPKDI 
EDAGRLQRGE IKGKDIPEEK RDYYLERRYP AFGNLVPRDV ASRAAKERCD AGYGVNNTGL 
AVFLDFGDAI KRLGRDVVEQ KYGNLFQMYE KIADENPYET PMMIYPAIHY TMGGLWVDYE 
LMTTIPGLFA IGEANFSDHG ANRLGASALM QGLADGYFVI PYTMQNYLAD QIQVPRFSTD 
RPEFEAAEKE LQDRITRIMN VKGNKSVDDL HKELGHIMWD NVGMGRDKAG LEKAIVKLDE 
LKKEFWSNVY VPGEANDLNV ELEKALRLAD FIEIGTLMAH DAMDREESCG GHFRIEHQTE 
EGEAKRDDEN FAYVSCWEYQ GEDKDPVMYK EELVYEETVR AQRNYKS