| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1594 |
|---|
| Symbol | |
|---|
| ID | 2552905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 1672142 |
|---|
| End bp | 1673677 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637150224 |
|---|
| Product | ComEC/Rec2-related protein |
|---|
| Protein accession | NP_905724 |
|---|
| Protein GI | 34541245 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0658] Predicted membrane metal-binding protein |
|---|
| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGTCT GCCCGAAGCC GTATTTTCGC CCCGGACCGT TTCTGTGGGT ATTGCTTTTC
CTGTCGACAG GCATAGGCCT GACGGAATAC TTTCGCTCTC CTGTCGTTGC GCTTGGTGCG
CTGACGACAG GATTTTTTCT TTATATCCTC AGTCTCTTTT TCCGGCCGGC CGTTGAGAAA
AGGACTGTCG CGGCTCTTCG TTTCGCCCCG ATCGGCCTGC TTCTCGTTGC TGCGGGAGCT
TTCTCCATAC AGCTGACACG AGAGCGACTG ACAGCTACTT CACGCTACAA GCTGTCTTCA
TCCGACACTT TTCGGGTCAT CGGGAATCCG GAGCCACGCG AGGGCAAACT GCGAATGCAG
GTACAACTGA CAGGAGGCTC CTCCCCATCT TATATCCTGT ACATCCGACA CGAAGGGGAA
TACGAGCCGG TCGCTCGCGG CGATATGCTC AAGCTTAGGA AATTCTATGC CCGATCGGTC
GAAGAATGGG AGCAGAAAGC TCCGGCAATG GGGCGGTATA TGGCGGGCAA AGGACTGTCC
GGCAGTCTGC ATGCCAAGAC CGGAGATGTA GAAATCTTGT CGACAGCCAA AGGGCCGTTC
TCCCTCAGGC AAAAGGCTTT GGATCTGTCG GATCGCTTGG CTGCCACATT GTACGAACTC
TCCCCTTCGC TACTGTCCGA TTCGCGGCGT GCGATGCTCG AAGCCATGTG TCTGGGGCGT
GAGGGCGAAG CTCCCGACGT TCGCCGCAAG TTCGTCGCGG CAGGCGTGGC ACATATCCTT
GCTGTGAGCG GTTTTCACGT GGGTATCGTA TTGGCTGCCC TCGGTTTTCT CATGCGTATT
CTGCCGATAC CGCAGCGATG GCGTCGGGCA GAGTGGCTGC TTCCGCTTGC AGGGGGATGG
ATATACGCAT TCGTTTGCGG TTTGGGTGCT CCTGTAGTCC GAGCCATGCT GATGGCTACC
TTATATATAG TCGGTAAATG CTCGGGCAGA CCGACGGATG GATTGAATGT TTGGGCTGCG
GCAGCGTCCA TTACACTCGT GATCGATCCC CTCTCTTTTT ATGACGTGGG ATTTGTGCTC
AGCTATGCCG CGGTAGCTTC TATCCTGATC TTCTTCAGAC CGCTGGCGTC CTTACTCCCC
GATGTGCGGC AGCCTCTTCT TCGTCTGTGT CGTGATGCTA TGGTGCTATG CCTCGCAGCA
CAGGCTTTCA CCCTGCCGTT GGCGGCACAT TATTTCGGAC ATGTCGGCAT TATTTTCCTT
TGGGTCAATC TTCCGCTTAC CCTGCTGGTC GTTTTTCTGA TTCCCCTTAG CCTTATTTAT
ATGGTCTTGG CAGCTGTCGG ATTACCCTTG ATGTTGTTGT CCCGAGTGGT CGGTATTTGT
GCCGATGGAG TGGAGAGATT GGTTACTGCG GCGGCGGCTG TGTCGCCGAG CATGGAATAC
GCCTGGCAAC CTTCGATGTC GGTCGTACTA TGTATTATGG CTGTATTGCT TGCGGTAGGT
ATCCTTTGGC GCGCAAATCG GCGACGATAC GAGTGA
|
|---|
| Protein sequence | MPVCPKPYFR PGPFLWVLLF LSTGIGLTEY FRSPVVALGA LTTGFFLYIL SLFFRPAVEK
RTVAALRFAP IGLLLVAAGA FSIQLTRERL TATSRYKLSS SDTFRVIGNP EPREGKLRMQ
VQLTGGSSPS YILYIRHEGE YEPVARGDML KLRKFYARSV EEWEQKAPAM GRYMAGKGLS
GSLHAKTGDV EILSTAKGPF SLRQKALDLS DRLAATLYEL SPSLLSDSRR AMLEAMCLGR
EGEAPDVRRK FVAAGVAHIL AVSGFHVGIV LAALGFLMRI LPIPQRWRRA EWLLPLAGGW
IYAFVCGLGA PVVRAMLMAT LYIVGKCSGR PTDGLNVWAA AASITLVIDP LSFYDVGFVL
SYAAVASILI FFRPLASLLP DVRQPLLRLC RDAMVLCLAA QAFTLPLAAH YFGHVGIIFL
WVNLPLTLLV VFLIPLSLIY MVLAAVGLPL MLLSRVVGIC ADGVERLVTA AAAVSPSMEY
AWQPSMSVVL CIMAVLLAVG ILWRANRRRY E
|
|---|
| |