Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1580 |
Symbol | |
ID | 2552935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 1657639 |
End bp | 1658511 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637150210 |
Product | hypothetical protein |
Protein accession | NP_905711 |
Protein GI | 34541232 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCAGACAA GCGACCTACT TAAGAAAGTT CGACGGATCG AAATCAAAGC GCGAGGCCTT TCTCGACAAA TCTTTGCCGG ACAGTATCAT TCCGCATTCA GAGGACGAGG TATGGCGTTC AGCGAAGTGC GCGAGTATAC TGTAGGAGAT GATGTGCGCG ACATCGACTG GAATGTGACG GCACGTTATG CACGTCCCTA TGTGAAAGTC TTCGAAGAGG AGCGTGAGCT GACAGTTATG TTGATGGTCG ACATGTCCGG TTCGTTGTCT TTCGGTACAG AGGTGGAGAC CAAGCGAGAG TTGACGGCTG AAGTAGCTGC TACATTGGCA TTTTCCGCTA TCCAAAATAA TGACAAGATC GGAGTCCTTT TCTTTACGGA CAGGATCGAA AAGTATGTGC CGCCCGCCAA GGGGAAGAAG CATATCCTAT ATATAATCAG GGAGCTGTTG GAGTTTCGTC CACAGAGCAG GGCCACGGAT CTTTCAGTTC CGCTCTCTTA CCTGACCCGC TTGGTGAAGA AGCGGTGTAC AGCATTCCTG ATTTCCGATT TCCAGTCAGA GAAAGATTCT TATGAAAAGA CCTTGCTGAT GTCTGCTCGT AAGCATGATA TTGTAGCCAT CAGGATATTC GATCGGCGAG AGGCCGATCT GCCAAATGTA GGGTTGATGC GCTTTCGCGA TGCAGAGACA GGGCAGACTC ATTGGGTGGA TACCGCTGAT AGCTCCGTTC GGAAAGCGTA TGCGGATGCC TATGAGCGAC GGCAAGTAGC ACTTGCCGTT TTGCTCAAAC GATGTGGTGT AGATACTACT GAGATACGTA CGGGGCAGGA TTTCGTGCAG CAGCTTCTTA TCTTATTTAA AAAACGCTCA TGA
|
Protein sequence | MQTSDLLKKV RRIEIKARGL SRQIFAGQYH SAFRGRGMAF SEVREYTVGD DVRDIDWNVT ARYARPYVKV FEEERELTVM LMVDMSGSLS FGTEVETKRE LTAEVAATLA FSAIQNNDKI GVLFFTDRIE KYVPPAKGKK HILYIIRELL EFRPQSRATD LSVPLSYLTR LVKKRCTAFL ISDFQSEKDS YEKTLLMSAR KHDIVAIRIF DRREADLPNV GLMRFRDAET GQTHWVDTAD SSVRKAYADA YERRQVALAV LLKRCGVDTT EIRTGQDFVQ QLLILFKKRS
|
| |