Gene PG1552 details

Gene Information

• Locus tag: PG1552
• Symbol: hmuR
• ID: 2552088
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 1629021
• End bp: 1630961
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637150188
• Product: TonB-dependent receptor HmuR
• Protein accession: NP_905689
• Protein GI: 34541210
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG4206] Outer membrane cobalamin receptor protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 26
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAAGTG TAGTAACAAA GCAGGCCCTC ATCGGCCTGC TTTTCTTTAG TATAAGTATA 
TACTCCCATG CGGCCAACCC TCCGGCCCAA CCTACCGACA CCATCGTATC CGGCAATATC 
GCACTTGAGG ATATAGTGGT GACCGGTAGC CGTACAGCCC GTCTGCTTAA AGATGTACCT 
GTCCCCACAA AGGTGTTCAA GGCCAAAGAT ATCAAAGCTA TAGCCCCATC TTCTTTCATT 
GACGTACTGC AGTATATTCT TCCCGGGATC GAGTTTACCA AGCATGGTTC CAGAGATCAG 
CTCAATGCTC AGGGATTTGA CGAAAGTTCT ATTCTCTTCC TCGTCGATGG CGAATTGATT 
TCAACGGGAT CTACCAGTGG AATAGACTTC GAACGAATCA ATCCGGATGA CATCGAGCGA 
ATCGAAGTGC TTCGTGGAGC TTCCTCTGCT TTGTACGGAT CTAATGCCAT CGGAGGTGTT 
ATCAATATCA TCACCCGTAC AGCCAAGGAT CCTTTTCGCG TATCTGCTTC GGCTCGATAC 
GATAGTCGCG ACGGACAGAA ATACGATGTG GCAGCAGGAG TGAAACGTGG GATCTTCACC 
AGTCAGTCCG GCGTACAATA TAGAGCAGAC AAAAGTTATA TTTTGGCCGA TCAGTTCGAG 
CAGGAACTGA ATGTTGCAGG CAATACGACA TGGAATATAA ATCAGAAGTT TACAATCTCT 
CCGACGGAAA ACTTATCCTT CAACCTTACC GGACTGGTGA ATCTGCGTAA GCAGCACTGG 
ACGGATAAGA TCGATTTTCT GTACAACTCC TACGATGTCA AAGCCGGTGC CAACTGGCGT 
ATCAGCGAGA CTTCGGATCT GGACGTCTCT TATCATTACG ACAAATATAG CCGTGATACC 
TGTCTGATCA AGACTGAGAA CCAAAAGAAA CTTCCCATTT TCGATGAGGA TATGCACCAT 
TTGCGAGCAC AATACAATCT CAATCTTGCT GAAGTCCACC TTCTCAATGT GGGTCTGGAG 
TATATCCATG ATAATGTAGC ATCGCCCCGT CTTTCCTCTC CGAACGACCC GGGGGAAAAG 
TCCGTGAACA ACAAAATCCT ATACGGACAG TACATATATA AAGTTACCCC CAAACTCGTA 
TTGAGCTATG GAGGGCGCTT GGACAAGCAC TCCGGATTCG GCTTGTACTA TACATCGCGC 
CTGTCTGCCA TGTACAAGTG CAGCCATGTC ACCAATCGCT TGTCCTACGC GGAAGGGTAT 
CGTGCCCCCT CTTTGCAGGA AATGTACTTT TTCTTCAATC ATGGTGCTTT CTTTATTTAC 
GGCAATCCGG ATTTGAAGCC GGAGAAGAGT CGCATGCTCT CATACTCGGC AGAAGCTCAC 
TGGAACAAGC TTACACTGAT GGGGAATGTC TTCTTCAATC ATGTTCGCAA TCGGATCGAT 
TTCACCTACA AAGGCACAGA TTTGATCTAC ACCAACGTAT CGAAAGAAAT GAGAATATTC 
GGCTTTGAAG GACAAGCGAA TGTGGTACTG CCTTACGGCT TTGGTTTTCG AGCTTCATAT 
TCCTACACTT ATGATCGATG GAAGGCGACC GATAAGGCCG GAACTGAGAT GAAGCTCTCA 
AACACCCGCC CTCATGCAGC TACTGCCACT CTCTCTTATG GACATAATTT TTCGAAGAAT 
TACAGACTAG CCTCCAACTT CTCCACGCGC TTCCTTTCCG ATCTGAAAAC AGGGCGTATG 
AACTCCGACG AGTTGTTTGA GGAAATAACG TATCCGGGTT ATACGATCTG TCGTTTGGAT 
ATTGAAAATC ATTTCTATCG GAACTATACG CTCCATATCG GTGCGGAGAA CCTGTTCGAT 
TATAAACCCA AAGCATTGGC ATTCAATTCC CCGACATCAC CCGGACGTAT CATATACGGG 
TTGGTTCGGA TCACTTTCTA A 

 

Protein sequence

MKSVVTKQAL IGLLFFSISI YSHAANPPAQ PTDTIVSGNI ALEDIVVTGS RTARLLKDVP 
VPTKVFKAKD IKAIAPSSFI DVLQYILPGI EFTKHGSRDQ LNAQGFDESS ILFLVDGELI 
STGSTSGIDF ERINPDDIER IEVLRGASSA LYGSNAIGGV INIITRTAKD PFRVSASARY 
DSRDGQKYDV AAGVKRGIFT SQSGVQYRAD KSYILADQFE QELNVAGNTT WNINQKFTIS 
PTENLSFNLT GLVNLRKQHW TDKIDFLYNS YDVKAGANWR ISETSDLDVS YHYDKYSRDT 
CLIKTENQKK LPIFDEDMHH LRAQYNLNLA EVHLLNVGLE YIHDNVASPR LSSPNDPGEK 
SVNNKILYGQ YIYKVTPKLV LSYGGRLDKH SGFGLYYTSR LSAMYKCSHV TNRLSYAEGY 
RAPSLQEMYF FFNHGAFFIY GNPDLKPEKS RMLSYSAEAH WNKLTLMGNV FFNHVRNRID 
FTYKGTDLIY TNVSKEMRIF GFEGQANVVL PYGFGFRASY SYTYDRWKAT DKAGTEMKLS 
NTRPHAATAT LSYGHNFSKN YRLASNFSTR FLSDLKTGRM NSDELFEEIT YPGYTICRLD 
IENHFYRNYT LHIGAENLFD YKPKALAFNS PTSPGRIIYG LVRITF