| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1542 |
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| Symbol | prtC |
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| ID | 2553029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 1620928 |
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| End bp | 1622172 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637150179 |
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| Product | collagenase |
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| Protein accession | NP_905681 |
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| Protein GI | 34541202 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTAA ACGACTTCGA GATAATGGCT CCAGTCGGTT CGTACGAATC GCTTATGGCA
GCCATCAAGG CAGGAGCAGA TTCAGTTTAC TTCGGGATTG AAGGACTGAA TATGCGTGCG
CGATCTGCCA ACAACTTCAC CACAGAAGAT CTGTACAAAA TAGCCGAGAT TTGCAGAGAT
AAAGGCGTAA AGAGCTATTT AACGGTGAAT ACCGTCATAT ACGATGAGGA CATAGCACTC
ATGCGCTCCG TCATCGATGC GGCACAAAAG GCACAAATAT CTGCCATTAT AGCTTCCGAC
GTAGCTGCGA TGATGTATGC CAACGAGATC GGAGTAGAAG TGCATCTGTC CACTCAGCTC
AATATCAGCA ACGCGGAGGC CCTACGCTTT TATTCGCGCT TTGCCGATGT GGTCGTATTG
GCAAGAGAGC TGAATATGGA TCAGGTGCGT ACAATCCACG AGACCATCGT CAGGGATAAT
ATCTGTGGGC CTAAAGGCCA TCCCGTACGT ATAGAGATGT TTGCTCACGG CGCTCTGTGT
ATGGCCGTTT CGGGCAAGTG CTATCTAAGC CTGCACGAAC ACAACAGCTC CGCCAACAGA
GGAGCCTGTG CGCAGATCTG CAGGAGGGGC TACACCGTCA AGGACAAGGA TAGCGGTCTG
GAACTGGACA TTGAGAACCA ATACATCATG TCGCCGAAAG ATCTGAAGAC TATTCATTTC
ATCAATAAGA TGATGGATGC CGGCGTACGA GTATTCAAGA TAGAAGGAAG GGCACGTGGC
CCCGAATACG TCTATACGGT CTGCCGCTGC TATAAAGAAG CGATCGAAGC CTACTGCAAC
GGCACCTATG ATGAAGAGGC CATAGGCCGG TGGGACGAAC AATTGGCTAC GGTATTCAAC
CGAGGCTTTT GGGATGGCTA CTACCTCGGA CAACGGCTCG GCGAATGGAC ACATCGTTAC
GGCTCAGGAG CTACGCGACA GAAAATATAT GTAGGCAAGG GGATCAAATA CTTCAGCCGT
CTCGGTGTGG CTGAATTCGA GATAGAGTCC GGCGAACTGC ATATAGGCGA TGAGATTGTG
ATCACCGGCC CTACTACAGG TGTGATCATC CAAAAGGTGG AAGAGATCCG ATACGAACTG
CAAACCGTGG AAAAGGCGAC AAAGGGACAA CGCATTTCCA TTCCGGTAAA GGAGAAAGTG
CGTCCGTCGG ACAAGCTCTA CCGGTTCGAC AAAAGAGAAG AATAA
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| Protein sequence | MNVNDFEIMA PVGSYESLMA AIKAGADSVY FGIEGLNMRA RSANNFTTED LYKIAEICRD
KGVKSYLTVN TVIYDEDIAL MRSVIDAAQK AQISAIIASD VAAMMYANEI GVEVHLSTQL
NISNAEALRF YSRFADVVVL ARELNMDQVR TIHETIVRDN ICGPKGHPVR IEMFAHGALC
MAVSGKCYLS LHEHNSSANR GACAQICRRG YTVKDKDSGL ELDIENQYIM SPKDLKTIHF
INKMMDAGVR VFKIEGRARG PEYVYTVCRC YKEAIEAYCN GTYDEEAIGR WDEQLATVFN
RGFWDGYYLG QRLGEWTHRY GSGATRQKIY VGKGIKYFSR LGVAEFEIES GELHIGDEIV
ITGPTTGVII QKVEEIRYEL QTVEKATKGQ RISIPVKEKV RPSDKLYRFD KREE
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