Gene PG1533 details

Gene Information

• Locus tag: PG1533
• ID: 2553056
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 1611803
• End bp: 1613851
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637150171
• Product: TOPRIM domain-containing protein
• Protein accession: NP_905673
• Protein GI: 34541194

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 5
• Fosmid unclonability p-value: 0.000100507
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAATCATA TCAAGGAACA AATACTGGAA AGAACGGATG GAGGGTTGCT TGTATTCAAC 
TACTATATGC CTTTTCCTTT CAAGCCGAAG AAGAAATTTC AAAACCCGCT CTACGAAGAC 
AAACGAGCTT CCTGTTATAT CTATAAGGTG GCAAAAACGG GAGTTTACCG GATGAATGAT 
TTTGGCGATC CCAATTATTC GGGAGATTGT TTTTGGTTTG TCGCCGCCAT GTATGGCATG 
GACGTACAAA AAGATTTTGT ACATATCCTG AAGAAAATTG TCCGTGACCT TTCTCTTCCG 
ATAGCTATAC CTGCACACTC GAAAGAGTCT TTTCCGACAC GAAACAGAAA ACTCCCATAT 
CTCGAACAAA CTTTATCAGA ACCGAAAGAT GCATCCATGA GACCTTATAA AATCACAGAA 
AAACCTTACA CCCGAAGCGA GCTTTCTTTC TGGGAACAAT ATGGTACCGG ACAAAATATT 
TTGGATCGAT ATCATGTCAA ATCTCTGCAA ACTTTCCAAA GCGAAAATGC CGAAGGAAAA 
AGCTACTGTT TTACGAATAC CTCAAAAGAG CCGATCTTCG GCTTCCTGCG CAAAGACTAT 
GTAAAGATAT ATCGTCCTTT CAGTCAATGC CGGTTCGTTT ACGGGGGAAT ATTGCCGGAA 
ACCTATGTGT TCGGGATGGA GCAACTTCCG CAAAGAGGAG ATATACTTTT CATCACGGGA 
GGAGAGAAAG ATGTATTATC CCTTGCCTCT CATGGATTCC ATGCCATCTG TTTCAACAGT 
GAGACAGGCA ATATCGAAGA ATCCGTCATC GAAATGCTTG CACGAAGGTT CAGGCATATT 
TTCTTTTTGT ACGATATGGA CGAAACGGGC ATAAAAGCCT CTACACGCTG GTGCGAACGT 
TTTTCTCACC ATAAATTACA GCGGATCGAA TTGCCTTTAT CCGGGAACAA ACAAGAGAAA 
GATATCTCCG ATTACTTCAA GCTGGGAAAC AGCACAGAAG ATTTCAGGAA GCTGATATCC 
GACCATTTGG AACAATTATA TACACAAACC ATTATGCTTT TAAGTTCGTG TGAAATCAAT 
TATAACAATC CGCCCGATCG TTCCAAAACG GTTATTTCCG TGAACGACGT TCCTTTGGGA 
ACCTACGACA ATCTGTTCTG CATTACGGGT GGTGAGGGAA CGGGCAAGAG CAACTATATC 
GCGGCGATTA TTTCCGGAGT GTTGCATACT GAAAAGAGGG ATTTCCCGAT AGATCTGCTC 
GGACTGGATG TTTGTCCGAA TATGCGGAGC AAAGCGGTTC TGCACTACGA TACGGAACAG 
TCGGAATATC AACTTCATAA AAACATCGGA AAAACACTCC GAAGAGCCTC TCTTACGTCT 
GTTCCTGATT TCTATCATCC CATATTTCTT GCAGCTCTTT CACGTAAAGA GAGATTGCAG 
TTGATAAAAG ACAGCATCGA TTTGTATCAT CACCGGTATG GAGGAATTCA TCTGGTCGTC 
ATAGATGGAA TAGCCGACTT GATCCGTTCG GCCAATGATG AAAGCGAGAG TATTGCCATT 
GTGGACGAAC TCTACCGGCT TGCCGGTATC TATAATACCT GTATTATCTG TGTACTCCAT 
TTTGTCCCGA ACGGGATTAA ACTGCGTGGG CATATCGGTT CGGAACTTCA GCGCAAGTCG 
GCGGCCATCC TCTCCATAGA GAAAGATGAG AATCCGGCTT TGTCGGTCGT AAAAGCACTT 
AAAGTAAGGG ATGGAAGCCC GTTGGATGTA CCTTTGATGC TGTTCGGATG GGACAGGGAA 
AAGGAAATGC ACGTTTACCG GGGAGAGAAA TCTCCGGAAG ACAAAGAAAA ACGGAAACTT 
ACGGAATTGG GACAAATCGC AAAAGAAGTC TTTCACGCCC AAGAGCATTT ATCTTACAAC 
GAACTGGTCG AAAGAATCAT GCAAACGGTC GACGTCAAAG ACCGTACGGC CAAGAGTTAT 
ATCAGTTATA TGCGAAACAA TGGAATTATT GAACAACAAA CGAATAATCT TTACAACCTG 
AAACTATGA 

 

Protein sequence

MNHIKEQILE RTDGGLLVFN YYMPFPFKPK KKFQNPLYED KRASCYIYKV AKTGVYRMND 
FGDPNYSGDC FWFVAAMYGM DVQKDFVHIL KKIVRDLSLP IAIPAHSKES FPTRNRKLPY 
LEQTLSEPKD ASMRPYKITE KPYTRSELSF WEQYGTGQNI LDRYHVKSLQ TFQSENAEGK 
SYCFTNTSKE PIFGFLRKDY VKIYRPFSQC RFVYGGILPE TYVFGMEQLP QRGDILFITG 
GEKDVLSLAS HGFHAICFNS ETGNIEESVI EMLARRFRHI FFLYDMDETG IKASTRWCER 
FSHHKLQRIE LPLSGNKQEK DISDYFKLGN STEDFRKLIS DHLEQLYTQT IMLLSSCEIN 
YNNPPDRSKT VISVNDVPLG TYDNLFCITG GEGTGKSNYI AAIISGVLHT EKRDFPIDLL 
GLDVCPNMRS KAVLHYDTEQ SEYQLHKNIG KTLRRASLTS VPDFYHPIFL AALSRKERLQ 
LIKDSIDLYH HRYGGIHLVV IDGIADLIRS ANDESESIAI VDELYRLAGI YNTCIICVLH 
FVPNGIKLRG HIGSELQRKS AAILSIEKDE NPALSVVKAL KVRDGSPLDV PLMLFGWDRE 
KEMHVYRGEK SPEDKEKRKL TELGQIAKEV FHAQEHLSYN ELVERIMQTV DVKDRTAKSY 
ISYMRNNGII EQQTNNLYNL KL