Gene PG1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG1501 
Symbol 
ID2553167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand
Start bp1578590 
End bp1579189 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content36% 
IMG OID637150145 
ProductTetR family transcriptional regulator 
Protein accessionNP_905647 
Protein GI34541168 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00296827 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTACAA AAAACACGAA AGAATTGGTC CTTTTAGAGG CGTTTAAGTT GTTTTCGGAA 
AAACCTTACG ACAAGGTTAC TTATACAAAC CTCCAGGAGA ATACCGGATT AAGCAGAGGC
AGCGTGTTGC ATCATACAAA ATCAAAGTCT GCTCTTTTTG CAACAGTGTT AAGTGAGTTT
ATACTCGCAA GTTCCATTCC TGAGCGTTCT TTTGAAAATG GAGAAAGCCT CAAAGGTTTT
ATACAACGCT TCATCGAAAA TTGTCGTATA GAGCAAAAGA CTTTGCAAAA AAGAGGAATT
GAGAACATAA ATAAATCTAT GCTCAACTTA TGTTCTCAAA CTTTTTACTA CTGCCCAATT
ATGGCAGAAC GATATGCAGA ATGGATGAAA AACCAGCAAA GGACTTGGGT TAAAATAATT
AGAATTGCGA TGGATAGGAA AGAAATAAGA AGTGATGTTG ATGTGGAAAT GGTTGCATCT
TTATTTCATA ATCTGTATTT AGGATTTTCT TTCTCCGGTA GCACAGAAAG GGGGGGGTAC
GACTTAAATT TTCTTGAAAA AGAGTTCGGC TTCATTTACT CCTTTCTATT AAAAGAATAA
 
Protein sequence
MSTKNTKELV LLEAFKLFSE KPYDKVTYTN LQENTGLSRG SVLHHTKSKS ALFATVLSEF 
ILASSIPERS FENGESLKGF IQRFIENCRI EQKTLQKRGI ENINKSMLNL CSQTFYYCPI
MAERYAEWMK NQQRTWVKII RIAMDRKEIR SDVDVEMVAS LFHNLYLGFS FSGSTERGGY
DLNFLEKEFG FIYSFLLKE