Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1501 |
Symbol | |
ID | 2553167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 1578590 |
End bp | 1579189 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637150145 |
Product | TetR family transcriptional regulator |
Protein accession | NP_905647 |
Protein GI | 34541168 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00296827 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTACAA AAAACACGAA AGAATTGGTC CTTTTAGAGG CGTTTAAGTT GTTTTCGGAA AAACCTTACG ACAAGGTTAC TTATACAAAC CTCCAGGAGA ATACCGGATT AAGCAGAGGC AGCGTGTTGC ATCATACAAA ATCAAAGTCT GCTCTTTTTG CAACAGTGTT AAGTGAGTTT ATACTCGCAA GTTCCATTCC TGAGCGTTCT TTTGAAAATG GAGAAAGCCT CAAAGGTTTT ATACAACGCT TCATCGAAAA TTGTCGTATA GAGCAAAAGA CTTTGCAAAA AAGAGGAATT GAGAACATAA ATAAATCTAT GCTCAACTTA TGTTCTCAAA CTTTTTACTA CTGCCCAATT ATGGCAGAAC GATATGCAGA ATGGATGAAA AACCAGCAAA GGACTTGGGT TAAAATAATT AGAATTGCGA TGGATAGGAA AGAAATAAGA AGTGATGTTG ATGTGGAAAT GGTTGCATCT TTATTTCATA ATCTGTATTT AGGATTTTCT TTCTCCGGTA GCACAGAAAG GGGGGGGTAC GACTTAAATT TTCTTGAAAA AGAGTTCGGC TTCATTTACT CCTTTCTATT AAAAGAATAA
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Protein sequence | MSTKNTKELV LLEAFKLFSE KPYDKVTYTN LQENTGLSRG SVLHHTKSKS ALFATVLSEF ILASSIPERS FENGESLKGF IQRFIENCRI EQKTLQKRGI ENINKSMLNL CSQTFYYCPI MAERYAEWMK NQQRTWVKII RIAMDRKEIR SDVDVEMVAS LFHNLYLGFS FSGSTERGGY DLNFLEKEFG FIYSFLLKE
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