| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1495 |
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| Symbol | topB-2 |
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| ID | 2553189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 1571383 |
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| End bp | 1573476 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637150139 |
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| Product | DNA topoisomerase III |
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| Protein accession | NP_905641 |
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| Protein GI | 34541162 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0210844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATGTA TCATTGCCGA GAAACCCTCG GTCGCCCGCG ACATAGCCCG CATCGTCGGT
GCAACGCACA AAGAAGAGGG CTGTTTCTCC GGAAACGGCC ATGTGGTTAC CTGGGCCTTC
GGACACCTCG TTACCCTTGC GATGCCCGAA GCATACGGCT TTCCGACGTA CAGCCGCGAG
CAACTGCCCA TTATCCCCGA ACCTTTCCGG TTAGTCGTCC GACAGATCCG CAAAGGAACG
ACCTATACGG ACGACCCGTC CGCCTTGAAG CAACTCAATA TCATCCGCAA GTGTTTCGAC
CGAAGCGATC ACATCATCGT CGCCACCGAC GCCGGACGCG AAGGCGAGTT GATCTTCCGC
CTGATCTATG CTTATTTGGA TTGCCGCAAA CCTTTCGACC GCCTGTGGAT CAGCTCCCTC
ACCGATAAGG CTATCCGTGA GGGACTGTCC CGTCCGGCTG ACGGCCGGCA GTACGACCGC
CTTTATCTCT CGGGCAAGGC TCGCAGTGAA GCCGACTGGC TTGTCGGTAT CAATGCCAGC
CGCGCCCTCT CCATCGCTCG CGGAGGCGCT TATTCCCTGG GAAGAGTACA GACACCGACT
CTGTCGATGA TTTGCCGCCG CTATATCGAG CACCGGGATT TCCGGTCCGT ACCGTTTTGG
AAAATCCATG CGCTGCCCAC CGGCCTCTCC GTCAAGGCCA TCGGAGAAAC GACATACGAA
AGCCGCAGAG CAGCGGACAG GGCGATGAAA GATCTGGATC CGCGCGAAGC ACTCATCGTT
TCGTCCGTTT CCGTACAAAC GAATCCTGTG CCACCACCTT TACTCTACGA TCTGACTGCC
CTTCAGAAAG AAGCCAACAA GCGATACGGA TATACGGCGG AAAAGACGCT CTCTCTGGCC
CAAAGCCTGT ACGAGAAAAA GTGTACCACC TATCCCCGTA CAGGCAGCCG GTATATCAGC
GAAGACATCT TTGAAGAGAT CCCTTCGCTA TTAGAAAGTC TGAAAGATGA TCCCGATTAT
GGCGATTACG TCGAAAAGCT CACTGCCGGT ACACTTAACC GCCGGAGCGT GGACGATACG
AAAGTAACCG ACCACCATGC CATTCTCCTT ACCGGAGAAA AGTCCGACAG CCTGACCCGC
GACGAAGAGG TGCTCTACCG AATGGTCACC GTGCGTATGC TGGAATCCTT TTCCGAAGCG
GCCATCGAAG AAACGCTGAC GGCGATACTC TCTCAAAGGG AGCATCGTTT CGGGATAAAG
GCGAAGAGAC GGGTTAAGTC GGGCTGGAAA GCCATCCGCG GATCGATGGA AGAGCCTGTA
GAAGAAGGAG AAACCGTTGT GGACAGCTTT CCCGAATGGC AGGAAGGCGA CCGGCTCGAT
GTTTTCGGAT TCGAAATGAC CGAACATCAA ACAAAGCCCA AGCCCCTTTA TACGGAAGCC
ATGTTGCTGT CGGCCATGGA GCACGCCGGA CGGGAAGTTG CGGACGAAGA AGCCCGCAAA
GCCCTCGCCG GTTGCGGCAT CGGTACGCCT GCCACACGTG CGGCCATCAT CGAGACATTG
ATCCTGCGAG AATATATCCG CCGGGAGAAG AAGATGCTTA TCCCGACCGA AAAAGGTCTT
TCCGTCTATA AACTGGTCGC CGGACGAAAG ATCGCCGACG CCGAAATGAC GGGAGCATGG
GAAGTCGCTC TGGCTGCCAT TGAAGCAGGC GCCATGGACG AACGGACATT CGGGAAGAGC
ATCGAAGTTT ATACCCGTCA AATATGCGAA GAACTGCTGA CGACAGCCGC CGGAAACACG
GATGCTCATT ACAAAACTTA CCGCTGCCCG CTATGCGGGA ACGATTCGGT ACGGGTGTTT
CCCAAAATCG TCAAATGCGT AACGGATGGT TGTGGGTTCA AAGTCTTCCG GGAGCTTTGC
GGCACCCTCC TGAGCAAGGA ATATATTCAT GCCCTGATGA CTGACGGATG CACTCCGCTA
CTCTGTCGGC TGACCGGCAA ATCGGGAAAA ACCTTCAATG CCCGCCTGAA GCTCGACAAA
GATGGCGGCA CCTCCTTCGT CTTCGATTCC AAACCCCGTA AACCTCAAAC ATAA
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| Protein sequence | MKCIIAEKPS VARDIARIVG ATHKEEGCFS GNGHVVTWAF GHLVTLAMPE AYGFPTYSRE
QLPIIPEPFR LVVRQIRKGT TYTDDPSALK QLNIIRKCFD RSDHIIVATD AGREGELIFR
LIYAYLDCRK PFDRLWISSL TDKAIREGLS RPADGRQYDR LYLSGKARSE ADWLVGINAS
RALSIARGGA YSLGRVQTPT LSMICRRYIE HRDFRSVPFW KIHALPTGLS VKAIGETTYE
SRRAADRAMK DLDPREALIV SSVSVQTNPV PPPLLYDLTA LQKEANKRYG YTAEKTLSLA
QSLYEKKCTT YPRTGSRYIS EDIFEEIPSL LESLKDDPDY GDYVEKLTAG TLNRRSVDDT
KVTDHHAILL TGEKSDSLTR DEEVLYRMVT VRMLESFSEA AIEETLTAIL SQREHRFGIK
AKRRVKSGWK AIRGSMEEPV EEGETVVDSF PEWQEGDRLD VFGFEMTEHQ TKPKPLYTEA
MLLSAMEHAG REVADEEARK ALAGCGIGTP ATRAAIIETL ILREYIRREK KMLIPTEKGL
SVYKLVAGRK IADAEMTGAW EVALAAIEAG AMDERTFGKS IEVYTRQICE ELLTTAAGNT
DAHYKTYRCP LCGNDSVRVF PKIVKCVTDG CGFKVFRELC GTLLSKEYIH ALMTDGCTPL
LCRLTGKSGK TFNARLKLDK DGGTSFVFDS KPRKPQT
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