| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1493 |
|---|
| Symbol | |
|---|
| ID | 2552126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | + |
|---|
| Start bp | 1566923 |
|---|
| End bp | 1569598 |
|---|
| Gene Length | 2676 bp |
|---|
| Protein Length | 891 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637150137 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_905639 |
|---|
| Protein GI | 34541160 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.208362 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACATCT TTGGATATGT TGCACGAAAT GTTCTTTTTG TTTTATTCGG ATTGATATTC
GGATATGAGG TTTCATATGC ACAGACAATT ACGATAAAAG GACAAGTGCT TGATGAAAAA
AAACAACCTG TCTCATATGC AAGTGTTGTT ATCTCAACGG ATAGTTTATC TAAAAAAGAC
ATTTCCTATG CTGTAACGGA TGAGCATGGG CAATTTAGGA TAGGACAACT TTCGGCTATT
CCTGACAAGA GATGGATTCA TGTTCGTTCA ATTGGCTACT TGGGATTTCA TAAACAAATT
TCTCTTAGGG CAGTTAAGTC ACCTCTCGAT ATAACTCTTA CAGAAGACAC AAAAGAGTTG
GAAGAGGTTG TTGTTGTGGC AAGAGCACGT GATGCTTATG CTAAAGGAGA TACAATTGTT
TTTAACAGCA AGAATTACAC ACTGGGGAAT GAACGTAATC TTGGGGATGT AGTAAAAAAG
ATGCCTGGCA TGGAAGTTGA CCAGACAGGA AATATCTCAT ATCAAGGAAA GAAAATTGGA
AAGGTCTTGG TTGACGGGCA GGATATTTTA TCCTCTTCTT CCGGTGTTGC CATGAATACG
CTTCCTCCTG ATTTTGCCAA TTCGATAGAA TTGCTTTCGA ATTATACGGA TGGTGATATT
GCCCATGCTT TCAAGGCAGA AGAACAATTA GCCCTCAATC TGAAGTCCAA TAAAAAAGTT
GCTTTAAGCG GTTCTTTTGA AGGCGGAGGC GGCCTGAAAG ACAAATTTAT CAGCAAAGCA
TCTTTGATTA CAGTCTTACC AAAAATATCT GCCAGTACCA TCATTAACGC CAATAATACA
GGTGAGGCTG TTTTTTCGAT TCAAGATTAT ATGTCGAATA TCATAGACTT TGAATCGATC
CGAAGTGGAG CTTCAACGCA GACATCTTTA AGTTTATCTC CTGAAGAACA ACAACTCTTA
CTGCCTCCGA CGAATGAACA TGCACGTACG GCAGGATTAG CAAACATAAA TATATCATGG
ACCCCTCACT CAAGCTACAA ACTCAGAGCA AGTACACTGT TCAACAAAGG TAAATCAGAA
GGGGCGCATA CAAAGACGGA TACATATACT TTGCCGGAGA ATTATTTTAC AAATATATCA
ACAGGTACTG CCGATAAAGA GACCCAACTT GTATCTCAAT ATTTGTCTCA GAAATGGATT
CCTTCTCGTT TTTTCTCTGT CAGTGCTAAG ACAAAGATAG ACATACGAAA CCATAATGCC
GATAATATCT ATGCTAATAC ATTCAATGAT AATCATATCC ATGCATTAGA AAAGCCGAAA
AATCACTTTT CCGGTATCAA ACAGGATATT GAGATGAAAT GGCTTTTGAG CAAAGGGCTT
CTTTTCGGTG GAGGAAGTTT TGTTTTCAAC AAAGGAAAGA TCAATAGTGA TATATATACC
GATGTCTTAC TGCTTCCATT ACCCCATATA AATGGAAATT CTATTTATCC TTATTTTCAT
GAACACATAA AAAAAGACAT GGAAAAAGGA TTCAACGCCT ACGTAGGTGG AATGTATCCT
GTATTGAATA ATATATATCT GCGAGGTGAG TTTTCCATGT CGATGAATTG GAATGAACTT
AAGATGGCTT ATCCTACGAG TATAAACGAG GAAACAGCCG ATTTAAGAGT ATTCAGGCCT
TACATTAGTC TGATGAAAAA CAAGGGGGTA TTCCGGTTTA ACATAGGCTC TTATTTTTCC
TCCTATAGAC AAAAAACATC TCCGGAACTA TTGAGAGAGA AATCTCTTTT TTATATTGAG
CCACATGCTT CAATCGAATT AGTAATGAGT AACCAGCATC GGTTAATGCT GTCTGTCTCT
GAAGCTGTTT CTCCTTCAAC CATCGATTAC TTTTCTCAGC AGATTTTGGC TAAAGGATAC
AATAACCTCC AATTACCCTC AAAATTATCG AACCCTTTTG CAAAAAGGTT TAAGGGAAAC
TTATCCTATG CCTATTTCAG CTTGTTTAAC CGGCTTTCGA TGTATGGCAA TTTAAGTTAT
ATCAAGGATA GAGATACGCA TATTACCGTC ACAACCTCAA AGGGACTATT GATCAGTAAT
TTTTATCAAG ATGGAGGATG GAGCAATACA TTAAGAACAA ACGCCTATTT GAGTAAGGGA
ATCGGCACCC TTCCATTGGA CATAAAATTA TCAGGTAAAT ATACGCTCAG CAAACACAAC
CTGATGCGTG TAGATAAAGA AGACGAATTA ATTAACAAAA GAGTAGATGC GAAATTGGAT
CTTATTTCAC GGCTGTACCA ATCTCCGGTT AATTTTGAGA TAGGAGTACG TTTTAGTCGT
CTTGACCAGA AATTTACGTA CAGCAATATC CACTCTTGGA ATCAAGAATT TGGAGGTTTC
GCAACAACTC ATGTAAATAT AGGAAATTTT GTTTTTTCTG TTTCTGGCAA GTCGAATAGA
ATTGAAGATG CCGAAGCCAA GCGCTATTTT AGGGATTTGG ACTTCTCTCT GAAATACAAA
TTAAGCAAGT TAGACATCAA ATTGCAAGGA GAGAATGTGT TCCATCTTAA AGATAATGAA
TGGATGAAAG AAATCCTTAC CCCGACAGTC CAATCAACTA TCCTATACAG ACGATTGCCT
GGGCATATTC TTTTGTCTCT CAGTTATACA TTATAA
|
|---|
| Protein sequence | MHIFGYVARN VLFVLFGLIF GYEVSYAQTI TIKGQVLDEK KQPVSYASVV ISTDSLSKKD
ISYAVTDEHG QFRIGQLSAI PDKRWIHVRS IGYLGFHKQI SLRAVKSPLD ITLTEDTKEL
EEVVVVARAR DAYAKGDTIV FNSKNYTLGN ERNLGDVVKK MPGMEVDQTG NISYQGKKIG
KVLVDGQDIL SSSSGVAMNT LPPDFANSIE LLSNYTDGDI AHAFKAEEQL ALNLKSNKKV
ALSGSFEGGG GLKDKFISKA SLITVLPKIS ASTIINANNT GEAVFSIQDY MSNIIDFESI
RSGASTQTSL SLSPEEQQLL LPPTNEHART AGLANINISW TPHSSYKLRA STLFNKGKSE
GAHTKTDTYT LPENYFTNIS TGTADKETQL VSQYLSQKWI PSRFFSVSAK TKIDIRNHNA
DNIYANTFND NHIHALEKPK NHFSGIKQDI EMKWLLSKGL LFGGGSFVFN KGKINSDIYT
DVLLLPLPHI NGNSIYPYFH EHIKKDMEKG FNAYVGGMYP VLNNIYLRGE FSMSMNWNEL
KMAYPTSINE ETADLRVFRP YISLMKNKGV FRFNIGSYFS SYRQKTSPEL LREKSLFYIE
PHASIELVMS NQHRLMLSVS EAVSPSTIDY FSQQILAKGY NNLQLPSKLS NPFAKRFKGN
LSYAYFSLFN RLSMYGNLSY IKDRDTHITV TTSKGLLISN FYQDGGWSNT LRTNAYLSKG
IGTLPLDIKL SGKYTLSKHN LMRVDKEDEL INKRVDAKLD LISRLYQSPV NFEIGVRFSR
LDQKFTYSNI HSWNQEFGGF ATTHVNIGNF VFSVSGKSNR IEDAEAKRYF RDLDFSLKYK
LSKLDIKLQG ENVFHLKDNE WMKEILTPTV QSTILYRRLP GHILLSLSYT L
|
|---|
| |