Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1454 |
Symbol | |
ID | 2553284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 1536967 |
End bp | 1538196 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637150102 |
Product | integrase |
Protein accession | NP_905604 |
Protein GI | 34541125 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATAG AGAAATTCAA GGTGTTGCTC TACCTGAAAA AGAGCAGACC CGACAAGTCG GGCAAAGCCC CGATCATGGG ACGCATTACC GTCAATCGTT CGATGGTGCA GTTCAGTTGC AAACTCTCCT GTACTCCTGA CTTATGGAAT CCCCGTGAGA GTCGATTGAA CGGTAAAAGC AATGAAGCAG TAGAGGTCAA TGCCAAATTA GACAAGTTGT TGCTTTCCAT TCATGCTGCA TTCGACACCT TGGTGGAACG CAAGGCAGAC TTTGATGCCG AAGCGGTCAA GAATCTGTTT CAGGGAAGTC TCGAAACACA GATGACCTTG CTGGCAATGA CGGACATCGT CTGCGAGGAA CTCCGTAAAC GTATCGGGAT AGACCGGGCA AAAGGAACAT ACCCCGCCTA TTTCTACACC CGAAGAACCT TGGCGGAGTT CATTCAAAAG AAATTCCACT CCAAGGACAT TGCCTTCGGT CAGCTGACCG AACAGTTCAT TCACGACTAT CAGTTTTTTG TCGTGGACGA CAAAGGGCTT ACCATAGAGA CCAGCCGACA CTACCTGGCC ATCATCAAAA AAGTATGCCG TAAAGCCTAC AAGGAAGGCT ATGCCGATAA ATGTTTTTTC GCTCATTTCA GTCTCCCCAA GCAAGAGGAG AAGACACCGA AAGCCCTAAG TCGGGAATCC TTTGAGAAAA TCCGTGACTT GGTCATTCCC GAACATCGTA GCTCTCATAT CTTGGCAAGA GATCTCTTCC TCTTTGCCTG CTATACGGGA ACTTCCTATG CTGATGCGGT ATCGGTTACA CGAGACAATC TCTTCACCGA TGATGAAGGA AGTCTATGGC TTAAATACCG TCGCAAGAAA AACGAACTTC AAGCCTGTGT CAAACTCCTG CCCGAAGCCC TTGAATTGAT AGAGAAATAC AACGACGATA CCCGTCCGAC ACTCTTTCCA ATGCTGTACC ACCCCAATCT ACGTCGCCTG ATGAAATGCC TTGCGGTTCT CGCCGACATA AAGGAAGACC TGACCTACCA TGCCGGAAGG CATTCCTTCG CTTCATTGAT TACTCTGGAA GCAGGAGTCC CCATAGAAAC TATCTGTAAG ATGCTGGGAC ATTCGAACCT GCAAACGACT CAGAGATACG CGAAGGTTAC CCCAAAGAAA CTCTTCGAGG ATATGGACAA ATACATCGAA GCGACAAAGG ATTTGAAACT CATATTATAA
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Protein sequence | MKIEKFKVLL YLKKSRPDKS GKAPIMGRIT VNRSMVQFSC KLSCTPDLWN PRESRLNGKS NEAVEVNAKL DKLLLSIHAA FDTLVERKAD FDAEAVKNLF QGSLETQMTL LAMTDIVCEE LRKRIGIDRA KGTYPAYFYT RRTLAEFIQK KFHSKDIAFG QLTEQFIHDY QFFVVDDKGL TIETSRHYLA IIKKVCRKAY KEGYADKCFF AHFSLPKQEE KTPKALSRES FEKIRDLVIP EHRSSHILAR DLFLFACYTG TSYADAVSVT RDNLFTDDEG SLWLKYRRKK NELQACVKLL PEALELIEKY NDDTRPTLFP MLYHPNLRRL MKCLAVLADI KEDLTYHAGR HSFASLITLE AGVPIETICK MLGHSNLQTT QRYAKVTPKK LFEDMDKYIE ATKDLKLIL
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