| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1434 |
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| Symbol | ispD |
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| ID | 2553363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 1519162 |
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| End bp | 1519830 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637150085 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | NP_905588 |
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| Protein GI | 34541109 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.145847 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGCAAA AACGCTATGC TCTGATCGTA GCCGGTGGTC ATGGGCTACG TATGGGGGCC
GATCGGCCAA AACAGTTTTT GCTTTTGGCC GGTCTACCGG TGCTGATGCA TACGCTGAAT
CGCTTTGCCC CTCATGTCGA TGCTATTGTA TTGGTATTGC CCACAGATCA TCATGCTTAT
TGGCAGGAAT TGTGCCGGAA GTATGACTTT TCGGTCTCTC ATCGAGTGGT TGCAGGTGGA
AATACACGTT TCGCCTCTGT TCGGAATGGA TTGCAGGTTG TCCCTGATGG TGTTTTGGTT
GCTGTTCATG ACGGGGTACG TCCTTTGGTC AGTGCTGAAA CTATCGATGC CTGTTTCGAT
CTTGCAGAGT TGAAGGGGGC TGTCGCTCCT TGTCGCCCTA TGACCGAATC GCTTCGCTAT
TATGCCACTG ATGGCAATTA TGCAGTGGAC AGGAGTCGGT ACGTCACGGT ACAAACTCCA
CAGACCTTTC GGAGCGAATG GCTTCGAGAG GCCTATCGGC AACCCTATGA AGAGTATTTT
ACCGATGATT GTTCGGTATA TGAACACCAT TTTGGCCGAC CGGTGGCATT GATTGTCGGT
AATATCGAAA ATATCAAATT GACTACTCCT CTCGATCTAT CCCTTGCCAA ACTGTTATTG
ACATCCTAA
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| Protein sequence | MEQKRYALIV AGGHGLRMGA DRPKQFLLLA GLPVLMHTLN RFAPHVDAIV LVLPTDHHAY
WQELCRKYDF SVSHRVVAGG NTRFASVRNG LQVVPDGVLV AVHDGVRPLV SAETIDACFD
LAELKGAVAP CRPMTESLRY YATDGNYAVD RSRYVTVQTP QTFRSEWLRE AYRQPYEEYF
TDDCSVYEHH FGRPVALIVG NIENIKLTTP LDLSLAKLLL TS
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