Gene PG1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG1428 
SymbolribH 
ID2552171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand- 
Start bp1514627 
End bp1515112 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content49% 
IMG OID637150079 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionNP_905582 
Protein GI34541103 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.470694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACAG CTTATCATAA CTTATCCGAC TACGACTACG AGAGCGTTCC CTGCGGCAAA 
GACTTACGTA TAGGAATTGC CGTTGCTGAA TGGAATCACA ATATCACAGA GCCACTGATG 
AAAGGGGCTA TCGATACCCT TTTGGAGCAT GGTGTGTCGG CTGACAATAT CATCGTACAG 
CATGTTCCCG GCACTTTCGA ACTTACCTAT GCAAGCGCAT ACCTTGCCGA ACAGCATGAA 
GTAGATGCAG TGATCGCTAT CGGCTGTGTA GTCAGAGGCG ACACCCCCCA CTTCGACTAT 
ATCTGCCAAG GGGTAACACA GGGAATCACC CAGTTGAACA TTGACGGCTT TGTACCAGTC 
ATTTTCGGAG TCCTTACCAC GGAAACAATG CTTCAGGCCG AAGAGCGTGC CGGGGGCAAG 
CATGGCAACA AAGGCACGGA AGCAGCCGTT ACAGCTCTTA AAATGGCAGG ATTGGAAAGA 
ATATAA
 
Protein sequence
MATAYHNLSD YDYESVPCGK DLRIGIAVAE WNHNITEPLM KGAIDTLLEH GVSADNIIVQ 
HVPGTFELTY ASAYLAEQHE VDAVIAIGCV VRGDTPHFDY ICQGVTQGIT QLNIDGFVPV 
IFGVLTTETM LQAEERAGGK HGNKGTEAAV TALKMAGLER I