| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1370 |
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| Symbol | lysS |
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| ID | 2551529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 1450583 |
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| End bp | 1452319 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637150032 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | NP_905535 |
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| Protein GI | 34541056 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.394303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATAC TCGAACTTTC GGAACAAGAA GTCGTACGCC GTAACAGCTT AGAGCAACTG
CGTAATTTGG GGATCGATCC ATATCCTGCA GCGGAATATA CCGTCAATGC CTATTCCGCC
GAGATCAAAA GGAATTTCAA TGGCGATGAG AATGTCGCCA AACGTCAAGT AAGCATTGCC
GGACGTATTA TGAGCCGCCG TATCATGGGG AAAGCTACAT TCATGGAGCT GCAAGATGCT
GAGGGGCGTA TCCAGATCTA TATTACTCGG GACGATATTT GTCCGGGTGA GGATAAGGAG
TTCTACAATA CGGTGGTCAA GAAGTGTACG GATATAGGTG ATTTTATCGG AGTGAAAGGG
TACGTATTCC GCACTCAGAT GGGAGAAATA TCGGTGCATG TGCAGGAGAT GACTTTCTTG
TCGAAAGCTA TCCGCCCCCT TCCTGTGGTA AAAGAAAAAG ATGGGGAGGT CTTCGATGGC
TTCACGGATC CGGAGCAGCG TTATCGTCAG CGATACGTGG ATCTGGTCGT CAATAGTCAT
GTCAAAGACA TTTTCCTCAA GCGTACGATG GTATTCAATT CGATGCGCAG TTTCTTCAAT
GAGTGCGGAT ACATCGAAGT GGATACACCT GTACTCCAAT CGATCCCGGG AGGTGCAGCT
GCGCGTCCTT TTATCACGCA TCATAACGCT CTGGACATTC CGCTCTATCT GAGAATCGCT
AACGAATTGT ATCTGAAGCG TCTGATCGTG GGCGGTTTCG ATGGTGTGTA TGAATTCAGC
CGCAATTTCC GAAATGAGGG GATGGACCGC ACGCATAATC CTGAGTTCAC GGCCATGGAG
ATCTATGTGG CGTATAAGGA TTACAACTGG ATGATGAACT TTACGGAGCA GATGCTCGAA
CGCATCTGTA TGGATGTGCT GGGTACTACT CAGATGAAGG TGGGCGGGAA ATTGATCGAC
TTCAAGGCCC CCTACAAGCG AGTGACCATG ATCGAAGCCA TCCATGAGCA TACGGGTATC
GACATCAGCG GAATGAACGA GGCCGAGCTG CGTCAGGTAT GCGACAAGCT GGGCGTAGAG
CACAATGAAA CGATGGGCAA AGGCAAGCTC ATCGATGAGA TCTTCGGCGA GAAGTGCGAG
AAGAACTATA TCCAGCCTAC TTTCATCACA GACTATCCGA AAGAAATGTC GCCTCTGACG
AAGGAGCACC GCACCAATCC GGAGCTGACA GAGCGATTCG AGCTGATGGT CAATGGCAAG
GAGTTGGCCA ACGCCTACTC GGAGCTGAAC GACCCGATTG ATCAGAGAGA ACGTTTCGAA
GAACAACTCA AGCTGTCCGA GAAAGGCGAT GACGAAGCCA TGTACATCGA CAACGACTTC
ATCCGTGCCC TTGAATACGG TATGCCGCCG ACCAGCGGTA TGGGTATCGG TATGGACCGT
TTGGTCATGC TATTGACAGG GCAGGAGAGT ATTCAGGAGG TGCTCCTCTT CCCACAGATG
AAGCCCGAGA AGGTGGCTCC ACGAGATACG AAAGAGAAGT TCGCCGTTTG TGGCGTTCCC
GAAGAGTGGG TACCTGTACT GCATAAGGCC GGCTATCTTA CCGTACAGTC GATGCGAGAG
GATAAACCGG GCAAGGTGAT GCAGCAGCTG ATGGACATCA ATAAGAAATA TAAGTTGGGG
CTTGCCGGTT TGAATCTGGA AACCGTTTCG GCTTGGCAGG AAGCCCCATA TGAGTAA
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| Protein sequence | MNILELSEQE VVRRNSLEQL RNLGIDPYPA AEYTVNAYSA EIKRNFNGDE NVAKRQVSIA
GRIMSRRIMG KATFMELQDA EGRIQIYITR DDICPGEDKE FYNTVVKKCT DIGDFIGVKG
YVFRTQMGEI SVHVQEMTFL SKAIRPLPVV KEKDGEVFDG FTDPEQRYRQ RYVDLVVNSH
VKDIFLKRTM VFNSMRSFFN ECGYIEVDTP VLQSIPGGAA ARPFITHHNA LDIPLYLRIA
NELYLKRLIV GGFDGVYEFS RNFRNEGMDR THNPEFTAME IYVAYKDYNW MMNFTEQMLE
RICMDVLGTT QMKVGGKLID FKAPYKRVTM IEAIHEHTGI DISGMNEAEL RQVCDKLGVE
HNETMGKGKL IDEIFGEKCE KNYIQPTFIT DYPKEMSPLT KEHRTNPELT ERFELMVNGK
ELANAYSELN DPIDQRERFE EQLKLSEKGD DEAMYIDNDF IRALEYGMPP TSGMGIGMDR
LVMLLTGQES IQEVLLFPQM KPEKVAPRDT KEKFAVCGVP EEWVPVLHKA GYLTVQSMRE
DKPGKVMQQL MDINKKYKLG LAGLNLETVS AWQEAPYE
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