Gene PG1364 details

Gene Information

• Locus tag: PG1364
• Symbol: dxr
• ID: 2551565
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 1444478
• End bp: 1445635
• Gene Length: 1158 bp
• Protein Length: 385 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637150026
• Product: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
• Protein accession: NP_905529
• Protein GI: 34541050
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase
• TIGRFAM ID: [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGAAAA ACATAGCCAT CCTTGGCTCG ACCGGATCCA TCGGTACACA GACACTCGAT 
ATTATCCATC TGAATCCGGA TCTTTTCGAT GTCTACCTCC TTACGGCAAA CAATAATGTA 
GACCTTTTGA TCCGACAGGC ACGCGAATAT CGGCCGGAAA TAGTCGTAAT AGCCAACGAC 
CAAAAATACC ATCTTATACA AGAGGCTTTG GCCGATTTGC CTATCAAGGT ATGGTGTGGA 
GCCGAGGCTA TTGCCGATGC GGTAACGGCT CCGGATATCG ATATGGTCGT GACGGCCATG 
GTAGGCTATT CGGGGTTGTT GCCTACGATC AAAGCCATCG AAGCCCGAAA GATGATAGCA 
CTTGCAAACA AAGAAACTCT CGTTGTGGCA GGCGAACTCA TCATGCGATT GGCGCAAGAC 
AATCAGGTAC CTATCCTTCC GGTCGATTCG GAGCATTCGG CTATTTTTCA GGCTCTTTTA 
GGAGAGAGAC AGCGGCCGGA GAAGATCCTG CTGACGGCTT CGGGAGGCCC TTTTCTGCAT 
CTGACAGCAG AGGAATTGCA GCATGCTACC CGTGAACAGG CTCTCCGCCA TCCTAATTGG 
AATATGGGGG CAAAGGTGAC TATCGATTCT GCTTCGCTCA TGAACAAGGG GTTTGAGATG 
ATCGAAGCCA AATGGTTGTT TGAGATGCAA CCCGATGAGA TCGAAATACT CGTGCACCCA 
CAAAGCATAA TACACTCCAT GGTGCAGTTC CGCGATGGTT CGGTCAAGGC TCAACTTGGT 
ATTCCCGATA TGCGTTTGCC TATCAGTTAT GCCCTTGGCA TTACCCACCG CATCCCGAAC 
GATTATCCTC GGGTGGATTT CACGGCTACC CCCCTGACCT TCGAACGCCC TGATCTCGAA 
CGATTCCCCA ATCTCTCTTA CGCTTTTGAT GCGATTCGTT TGGGTGGTAA TGCACCTTGT 
GCACTCAACG CTGCCAATGA GATTGCCGTG ACTGCTTTCC TGCGCGATGA AATTTCTTTT 
ACGGATATGA GCCGTCTGTT GTATGAAGTG ATGGAAAAGC ACGAATTGTT CCGAGAAGTA 
TCTTTACCCA CTTTCATCGA GACGGACAGC AACACACGCC GAGTGGCCGA ATCCCTTCTG 
CCCAAATTTC GTCGGTAA 

 

Protein sequence

MKKNIAILGS TGSIGTQTLD IIHLNPDLFD VYLLTANNNV DLLIRQAREY RPEIVVIAND 
QKYHLIQEAL ADLPIKVWCG AEAIADAVTA PDIDMVVTAM VGYSGLLPTI KAIEARKMIA 
LANKETLVVA GELIMRLAQD NQVPILPVDS EHSAIFQALL GERQRPEKIL LTASGGPFLH 
LTAEELQHAT REQALRHPNW NMGAKVTIDS ASLMNKGFEM IEAKWLFEMQ PDEIEILVHP 
QSIIHSMVQF RDGSVKAQLG IPDMRLPISY ALGITHRIPN DYPRVDFTAT PLTFERPDLE 
RFPNLSYAFD AIRLGGNAPC ALNAANEIAV TAFLRDEISF TDMSRLLYEV MEKHELFREV 
SLPTFIETDS NTRRVAESLL PKFRR