| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1354 |
|---|
| Symbol | |
|---|
| ID | 2551547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 1434034 |
|---|
| End bp | 1434855 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637150016 |
|---|
| Product | carbon-nitrogen family hydrolase |
|---|
| Protein accession | NP_905519 |
|---|
| Protein GI | 34541040 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAC ACGAGAGCTC TCAGCCATTG AGAGTTGCTG TAGCTCAATG CCGGATAGAC
TGGGAGGATA AGCACGCCAA TCTACGCCGA ATGGAGCGTT TGGCCGAAGA AACAGCCGGT
ATGGCGGATG TCCTCTTCTT TCCCGAAATG ATGACTACGG GCTTTTCGAT GAACGTACAA
GCTCTGGCGG AGCCTTTCGA AGAGGGCGAA ACTATCATGA GCCTGAAGAG AGTGACTGCT
CGTCATGGTT TGGCTCTGTC GGCTACGATG GCCGTACGGG AGAACGGGAA ATTCTATAAT
CGTGCCTATT TCGTGACACC GGAAGGAGAG GTCTTCCATC AGGACAAGAG GCACCTCTTC
CGTGTAGGGG GAGAGCATGA GGTGATGACT CCGGCACAAG AACGCCGGAT CTTCAACTAT
CGCGGTTGGA AGATCTTCAT CATTCCCTGC TATGATCTGC GTTTTCCCGT CTGGTGTACC
AATACGGATC TGGAATACGA TCTGCTCGTC TGCATGGCCA ACTGGCCTGA GCCGCGTCGC
GCCGTCTGGC AAACGCTACT CCAAGCTCGT GCCATGGAGA ACTATGCCTA TGTGTGCGGC
ATCAATCGGG TGGGGGAGGA CGGTATCGGT CTGCGCTATA CGGGCGATTC GGCTATCCTT
TCGCCTCGGG GCGAGTATCT TGCCACTTGT GCCGAAGGAG AGGAAAAGGT GCTGTACCAT
ACGCTCGATA AGGGGGCGAT GCAGCGTTTT CGCGACAAGT TCCCTGCGTG GATGGATATG
GACTCTTTCG TCATCAACTA TGATACCGAT CTGCATCCAT AG
|
|---|
| Protein sequence | MIKHESSQPL RVAVAQCRID WEDKHANLRR MERLAEETAG MADVLFFPEM MTTGFSMNVQ
ALAEPFEEGE TIMSLKRVTA RHGLALSATM AVRENGKFYN RAYFVTPEGE VFHQDKRHLF
RVGGEHEVMT PAQERRIFNY RGWKIFIIPC YDLRFPVWCT NTDLEYDLLV CMANWPEPRR
AVWQTLLQAR AMENYAYVCG INRVGEDGIG LRYTGDSAIL SPRGEYLATC AEGEEKVLYH
TLDKGAMQRF RDKFPAWMDM DSFVINYDTD LHP
|
|---|
| |