| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1343 |
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| Symbol | lipB |
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| ID | 2551531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 1423768 |
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| End bp | 1425246 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637150007 |
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| Product | lipoate-protein ligase B |
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| Protein accession | NP_905510 |
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| Protein GI | 34541031 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0321] Lipoate-protein ligase B
[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
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| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTGCA TATTATTAGG CTCAGGCACC AGCACCGGCG TCCCCGAAGT CGGCTGTCAT
TGTAGGGTAT GTCGTAGCGA AGACAGGCAT GACAAGCGCA CCCGTACTTC TCTTCTTATA
ATCACGGATG CAGGGAAACG AATCCTCATC GACTGCAGCC CGGACTTTCG CCAACAAGCT
CTGTTTGCCG GCATCGATTC GCTCGATGCC GTTTTGCTGA CTCACGAACA TTTTGACCAC
GTCGGTGGAC TCGACGATCT GCGCACCATC TGTTGGCATC GCGAACTTGC TGTCTATGCC
GAACAGAATG TATTGGACTC CATACGCGAC AGGCTGCACT ATGTATTCCG CAAAAATCCT
TATCCGGGCA CTCCTCTACT GAAACTATGC GAAGTAAAAC CCGATATGCC GTTTCAAGTG
GCAGACCTGA CGGTAGAGCC TCTTCGAATA ATGCATGGCA GGTTGCCGAT ACTCGGATAT
AAAATAGGAG AGATGGCTTT CCTTACCGAT ATGAAGGATA TAGCAGCAGA AGAAATCGAG
TGCCTGAAAA GCTGTCGACT TCTTTTTATC AACGGGCTTC GCTACCGAAA GGAACATCCT
TCGCACCAGA CCATAGAGCA GGCTATTGAC ACAATAGGAC AAATCGGTAA TCCGGAAAGT
GTCCTGATTC ACCTCTCCCA CCATGCACCC CTGCATCAGG AACATTTGGA AATTCTTCCT
CCACATATCC ATTCGGGATA TGATGGCCTG GAAGCTATAA TCGACGAAAA GGGGATAAGA
ATAAAAGACT TCGAACCGCA TGTTTCCCGT TCGGAATACC ATTATCAGGA CTGCGGACGC
ATCGGTTACG AATCGGCACT GACCCTGCAA CGCAAGCTCT TCCATGATGC TGTAGCAGAC
AAATTGGAAA ACAGGAAACC GCAAAATACG CTGCTCTTCT GTGAGCATGA ACCGGTTCTA
ACCTTGGGCA AACACGGTCA TGAAGAAAAT CTGTTGCTGT CCGAGTCCGA GCTGAAAAGT
CGCGACATCC GACTATTTCA TATAGAACGA GGAGGGGATA TCACCTACCA CGGGCCGGGA
CAAATTACGG GATACCCCAT ATTCGATCTC GAACAATACG GTATCGGCTT ACGCAGCTAT
ATCGAAATGC TTGAGCAGTG TATCATCGAT CTCATTGCCA TATTCGGTCT GAAAGGCGAA
CGTTCGGCCG GAGCATCCGG CGTATGGCTG GATCCCGATA TACCGGGGCG TACTCGCAAA
ATCTGCGCGA TAGGGGTGAA AAGCAGTCGG CACATAACGA TGCATGGCTT TGCCCTCAAT
GTCAATACGG ATCTCGATTA CTTCAAACTG ATCAACCCCT GTGGATTCTC GGATAGAGGG
GTGACTTCTA TCAGTCGTGA ACTTGGACGC GAGCAGGATT TTATCCTCGT CAAGCAACAA
CTCGAAGCTG TTTTCCGACG CAATTTCGGC GCTTTATAG
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| Protein sequence | MRCILLGSGT STGVPEVGCH CRVCRSEDRH DKRTRTSLLI ITDAGKRILI DCSPDFRQQA
LFAGIDSLDA VLLTHEHFDH VGGLDDLRTI CWHRELAVYA EQNVLDSIRD RLHYVFRKNP
YPGTPLLKLC EVKPDMPFQV ADLTVEPLRI MHGRLPILGY KIGEMAFLTD MKDIAAEEIE
CLKSCRLLFI NGLRYRKEHP SHQTIEQAID TIGQIGNPES VLIHLSHHAP LHQEHLEILP
PHIHSGYDGL EAIIDEKGIR IKDFEPHVSR SEYHYQDCGR IGYESALTLQ RKLFHDAVAD
KLENRKPQNT LLFCEHEPVL TLGKHGHEEN LLLSESELKS RDIRLFHIER GGDITYHGPG
QITGYPIFDL EQYGIGLRSY IEMLEQCIID LIAIFGLKGE RSAGASGVWL DPDIPGRTRK
ICAIGVKSSR HITMHGFALN VNTDLDYFKL INPCGFSDRG VTSISRELGR EQDFILVKQQ
LEAVFRRNFG AL
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