| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1318 |
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| Symbol | |
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| ID | 2551636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 1397292 |
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| End bp | 1397858 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637149988 |
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| Product | ECF subfamily RNA polymerase sigma factor |
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| Protein accession | NP_905491 |
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| Protein GI | 34541012 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGATA AGCTATTGAT TTCGGAAGAA GAGTTGCTGG AAGAGCTGAG AGATCCGGCA
AGGCGGCGTA TGGCCTTTGA AAAGGTAGTA CGCCTGTACA ACCGTAAACT CTACTGGCAA
ATCCGCCGAA TGGTGCTCAG TCATGACGAT ACGGACGACT TGCTCCAAAA TACCTTTATG
AAGGCATGGA GTGCATTGGA CGGTTTTCGT GGGGAGGCCA AACTCTCCAC CTGGCTCTAT
CGGATAGCCA TGTACGAATC ACTCAATTTC CTGAAGAAGA AAAAGATCGA AGACGATATG
AGTATATCGA TCACGGACGA AAACTCCTAT CTGCTCGACA ACCTCACGGG GGATGTTTAT
TTCGATGGAG ATGAAGCCGA GATTACCTTC CAAAAGGCTA TACTGGAATT GCCTGATAAA
CAGCGGTTGG TGTTCAACCT TCGGTACTAC GATGAGATGC CTTACGAAAA AATGGCCGAA
ATCACCGGTA CCTCGGAAGG TGCTCTCAAG GCATCGTACC ACCATGCTGT GAAGAAGTTG
GAGCGTTTTT TGTCGCCCGA TGATTAA
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| Protein sequence | MADKLLISEE ELLEELRDPA RRRMAFEKVV RLYNRKLYWQ IRRMVLSHDD TDDLLQNTFM
KAWSALDGFR GEAKLSTWLY RIAMYESLNF LKKKKIEDDM SISITDENSY LLDNLTGDVY
FDGDEAEITF QKAILELPDK QRLVFNLRYY DEMPYEKMAE ITGTSEGALK ASYHHAVKKL
ERFLSPDD
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