Gene PG1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG1280 
Symbol 
ID2553166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand
Start bp1357614 
End bp1358861 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content48% 
IMG OID637149957 
Producthypothetical protein 
Protein accessionNP_905461 
Protein GI34540982 
COG category[S] Function unknown 
COG ID[COG4198] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCA TAAAACCATT CAAAGGAGTA CGTCCTCCGA AAGAACTCGT AGAGCAAGTA 
GCATCTCGCC CCTACGACGT CCTTAATTCA GAAGAAGCTC GTAAAGAAGC GAAGGGCAAC
GAAAAGTCGC TCTATCATAT TATCCGTCCG GAGATCGATT TCCCTGTAGG AAAAGATGAA
CACGATGCGG ACGTGTATGA AAAAGCTGCC GAGAACTTCA GAATGTTCCA AGAAAAAGGC
TGGCTCGTAC AAGACACAAA AGAAAACTAC TACGTTTATG CCCAGACCAT GAATGGCAAA
ACGCAGTACG GCCTTGTCGT AGGTGCATAT GTAGAGGACT ATATGAACGG CGTGATCAAG
AAGCATGAGC TGACACGCCG CGACAAGGAA GAAGACCGCA TGAAGCACGT TCGTGTAAAC
GATGCCAACA TCGAGCCTGT TTTCTTTGCT TATCCCGAAA ACAAAGAACT GGACGCTATC
GTCAAAAAAT ATGCCGCTCG TCCTGCCGAA TATGATTTCG TGGCAGAATT CGACGGTTTT
GGCCATCACT TCTGGGTGAT CGACGAAGAA GCCGATATCA AACGTATCAC GGAGCTATTC
GCTGCCATGC CGGCACTCTA TATCGCTGAC GGTCACCACC GTTCGGCTGC TGCAGCCTTG
GTGGGCGCCG AAAAAGCCAA GAATAATCCC AACCATCGTG GCGATGAAGA GTACAACTAC
TTCATGGCTG TATGCTTCCC TGCCGATCAG CTCACAATCA TCGACTATAA CCGGGTAGTG
AAAGATCTGA ATGGCTTGAG TGATGAAGAA TTCTTGCAGA AACTGTCTCG ACACTTCGAA
GTAGAATGCA AAGGGACGGA AGAATATCGC CCCTCCAAGC TGCACAACTT CTCTCTCTAT
CTCGGTGGCA AATGGTATTC GCTGACAGCA AAAGCCGGCA CCTATGATGA CAACGATCCT
ATCGGTGTAC TGGATGTTAC GATCTCTTCG AATCTGATTC TGGATGAGAT CTTAGGCATC
AAAGATCTCC GCTCCGACAA GCGTATCGAC TTCGTGGGTG GTATTCGCGG ACTGGGAGAA
CTGAAAAAGC GTGTAGACAG TGGCGAAATG CGTGTTGCTC TCGCTCTTTA TCCGGTATCG
ATGAAACAGC TGATGGACAT TGCTGATTCG GGCAATATCA TGCCTCCCAA GACTACTTGG
TTCGAGCCGA AACTTCGTTC CGGTCTAATC ATCCACAAAC TGAGCTGA
 
Protein sequence
MAIIKPFKGV RPPKELVEQV ASRPYDVLNS EEARKEAKGN EKSLYHIIRP EIDFPVGKDE 
HDADVYEKAA ENFRMFQEKG WLVQDTKENY YVYAQTMNGK TQYGLVVGAY VEDYMNGVIK
KHELTRRDKE EDRMKHVRVN DANIEPVFFA YPENKELDAI VKKYAARPAE YDFVAEFDGF
GHHFWVIDEE ADIKRITELF AAMPALYIAD GHHRSAAAAL VGAEKAKNNP NHRGDEEYNY
FMAVCFPADQ LTIIDYNRVV KDLNGLSDEE FLQKLSRHFE VECKGTEEYR PSKLHNFSLY
LGGKWYSLTA KAGTYDDNDP IGVLDVTISS NLILDEILGI KDLRSDKRID FVGGIRGLGE
LKKRVDSGEM RVALALYPVS MKQLMDIADS GNIMPPKTTW FEPKLRSGLI IHKLS