Gene PG1255 details

Gene Information

• Locus tag: PG1255
• Symbol: recR
• ID: 2553145
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 1332218
• End bp: 1332841
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637149930
• Product: recombination protein RecR
• Protein accession: NP_905439
• Protein GI: 34540960
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 25
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATACAGA AATATTCTTC GCGTCTGCTT GAGAAGGCGA TAGACCAATT TGCCACATTG 
CCGGGTGTAG GGCGCAAGAC AGCCCTGCGC CTGGCTTTGT ACTTATTGCG CCAACCTGTG 
GAAAATACCC GTCAATTTGC AGCAGCCCTT GTAGATCTTC GGGAACATAT TTCCTATTGC 
AGGCACTGTC ATAATATCAG TGATTCCGAT GTTTGTACTA TCTGTGCAGA CCCCACTCGG 
GATCAGAGTA CACTCTGCGT AGTAGAGAAT ATCCGTGACG TTATGGCTAT CGAGAATACC 
TCACAGTATC GAGGCTTGTA TCATGTACTC GGTGGAGTCA TATCTCCCAT GGATGGGATC 
GGCCCGGGCG ATTTGCAAAT AGATTCTTTG GTGCATCGAG TAGCTTCTGA GCAGATTCAT 
GAGGTTATAT TGGCTTTGAG TACGACGATG GAGGGCGATA CTACCAACTT TTTCCTCTTT 
CGCAAGTTGG AGCCTACCGG CGTTCGGGTC AGTGTAATTG CTCGAGGCAT TGCTATAGGC 
GATGAGATCG AATATGCCGA TGAGATTACC CTCGGTCGTT CTATTCTCAA TCGTACCGAT 
TTCTCCGACT CAGTCAAATT CTGA 

 

Protein sequence

MIQKYSSRLL EKAIDQFATL PGVGRKTALR LALYLLRQPV ENTRQFAAAL VDLREHISYC 
RHCHNISDSD VCTICADPTR DQSTLCVVEN IRDVMAIENT SQYRGLYHVL GGVISPMDGI 
GPGDLQIDSL VHRVASEQIH EVILALSTTM EGDTTNFFLF RKLEPTGVRV SVIARGIAIG 
DEIEYADEIT LGRSILNRTD FSDSVKF