| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1246 |
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| Symbol | alaS |
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| ID | 2553302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 1321939 |
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| End bp | 1324569 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637149920 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | NP_905430 |
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| Protein GI | 34540951 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACGT CAAAAGAAAT CAGAGAGTCG TTCAAGACTT TTTTTGCCTC AAAAGGTCAT
AAAATCGTTC CCTCTGCCCC CATGGTGATC AAAGGCGACC CCACGCTCAT GTTCACCAAT
GCCGGCATGA ATCAGTTCAA GGATATCATA CTCGGAAATA CCGAGGCTAA ATACACTCGT
GTAGCAGACT CGCAGAAGTG TTTGCGTGTA AGCGGCAAGC ACAACGACCT CGAAGAGGTA
GGCCATGACA CCTATCATCA TACCATGTTC GAGATGCTCG GCAACTGGTC GTTCGGCGAT
TACTTCAAGA AAGAAGCCAT CGAATGGGCT TGGGAATACT TGGTGACGGT GTTGGGTCTG
GATCCCCAGC GTCTCTATGC TACCGTATTC GAAGGCAACC CCGAAGAAGG CCTTGACCGC
GACAACGAAG CGGCATCTTA CTGGGCACAG TTTCTGCCTG AAGAACGAAT CATCAACGGC
AATAAGCATG ACAACTTCTG GGAAATGGGC GATACCGGTC CCTGCGGTCC CTGCTCGGAA
ATACATATCG ACCTGCGTTC GGACGAAGAG CGCGCCCAAA TAAACGGTTT GGAGCTGATC
AATAAGAGCC ATCCGCAGGT CATTGAGATA TGGAACCTCG TCTTCATGCA ATACAATCGG
AAAGCCGATG CTTCCCTGAC GCCTCTGCCA CACAAGGTGA TCGATACGGG CATGGGATTC
GAGCGTCTGT GTATGGCCTT GCAGGGCAAG ACTTCCAATT ACGATACGGA TGTCTTTCAG
CCTCTTATCC GTACTTTGGC TACGATGACG GGAATCGGAT ACGGTGAGGA TTCTACCTCG
GATATAGCCA TGCGCGTAGT AGCCGACCAC ATCCGGACTA TCGCCTTTGC CATCACGGAC
GGCCAATTGC CCTCCAATGC CAAAGCCGGC TATGTCATTC GCCGTATCCT GCGCCGTGCG
GTTCGCTACG GCTACACCTT CCTACACTGC CGCGAAGCGT TCATGTACCG ATTGCTGCCG
ACACTGATCG ATACGATGGG CGATGCTTAT CCCGAATTGC AAGCACAGCG CGAACTGATC
AGCCGCGTGA TCAAAGAAGA GGAAGAGAGT TTCCTGCGTA CACTGGAAAC GGGTATCCGC
CTGCTGGAGA AAAAAATAGC CGACAATAAG GCTACCGGCT CCACCGTATT GGACGGTGTC
GCTGCCTTCG AATTATACGA TACGTTCGGA TTTCCCCTCG ACCTCACAGC CCTGATCCTA
TCGGAAAATG GGATGACGGT GGACGAATCA GGCTTCGACA CGGAGATGCA GAAGCAAAAA
GAGCGTGCCC GTAATGCCGC TGCCGTAGAA GCCGGCGACT GGGTAGTGCT ACGTGAGGGT
GAATCCAAAT TCTCAGGATA CGACTTCACC GAAACGGAAA CAGAGATCCT GCGCTACCGT
CAGGTGAAAC AGAAAAACAA GGAATACTTT CAGGTGGTAC TCTCGGACAC TCCTTTCTAT
GCAGAGATGG GTGGGCAGGT AGGCGACAGC GGTCAGCTGA TCGACGAATC GGGTGTAGCC
TATGATATAT TCGACACCAA ACGCGAAAAC AACCTCTCGG TACACCTGAT GAAGAAATTG
CCCGAAAGCA CGACGGATAC TTTCGTGGCA CGGATCAATC AGGACAAACG CCGCCAGGCA
GAGGCCAACC ATACGGCTAC GCACTTGCTG CACGAAGCTC TGCGCGAAGT CCTCGGAACG
CATGTGGAGC AGAAGGGTTC GTTTGTCAGC CCGGAGGTGC TTCGTTTCGA CTTCTCCCAC
TTCGGCAAGA TGTCTCCGGA GGAGATCCGC AAGGTGGAAG AATTGGTATC CGAGCGGATA
CGTGCCGACT TCCAACGGGA AGAGTTTCGC GATGTGCCGA TTGCCGAAGC ACAGGCTATG
GGAGCCATGG CCCTCTTCGG AGAGAAGTAT GGCGAAGAAG TGCGCGTACT CAAGTACGGC
TCTTCGGTAG AGTTGTGCGG AGGTACACAT ATTCCCTCTA CAGGCATGAT CGGGGCATTC
CGTATCGTTA CCGAAAGTTC GATAGCATCG GGGGTTCGTC GAATCGAAGC CGTAACGGGC
ATCGGTGCCG AACGTTTCAT ATACGAGAAA GAAGATATTC TGCTGGCTGT AAAGGAGCTG
TTCAACAACA ATCCGAACCT GATCAAGTCC ATCAAGAAAA TGCTCGAAGA GGATGCAAGT
CTGAAAAAAC AGATAGCGGA CATGAAGCAC GAGCGCATGC TGAAGTTCAA AAAGTCGCTT
CTCGAGCAGG ATGTTCGTCG CCGTGGTATC CGTCTTTTCC TCTTTCAGGA GATCATGGAG
GCAGAGACGG CCAAGGATAT AGCTTTCCAA ATTGCCGGCG AACTGCAAGA GAGCTTCGTC
CTCATAGCGG GAACGACCGA AGGTGGTGAA AAATGCGCGC TGACAGTGAT GCTTTCGAAA
GATCTCACGG AGGGAGGGAT GGATGCAGCC AAACTGGTAC GAAGTGCCGC CAAGCATATA
CAGGGCGGTG GTGGTGGACA GCCACACTTC GCTACGGCGG GTGGCAAGAA TCCTAAAGGA
CTGCCTGCTG CCATTCAGCA GATACTGACC GAAGCAGAGC TAACGGACTG A
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| Protein sequence | MLTSKEIRES FKTFFASKGH KIVPSAPMVI KGDPTLMFTN AGMNQFKDII LGNTEAKYTR
VADSQKCLRV SGKHNDLEEV GHDTYHHTMF EMLGNWSFGD YFKKEAIEWA WEYLVTVLGL
DPQRLYATVF EGNPEEGLDR DNEAASYWAQ FLPEERIING NKHDNFWEMG DTGPCGPCSE
IHIDLRSDEE RAQINGLELI NKSHPQVIEI WNLVFMQYNR KADASLTPLP HKVIDTGMGF
ERLCMALQGK TSNYDTDVFQ PLIRTLATMT GIGYGEDSTS DIAMRVVADH IRTIAFAITD
GQLPSNAKAG YVIRRILRRA VRYGYTFLHC REAFMYRLLP TLIDTMGDAY PELQAQRELI
SRVIKEEEES FLRTLETGIR LLEKKIADNK ATGSTVLDGV AAFELYDTFG FPLDLTALIL
SENGMTVDES GFDTEMQKQK ERARNAAAVE AGDWVVLREG ESKFSGYDFT ETETEILRYR
QVKQKNKEYF QVVLSDTPFY AEMGGQVGDS GQLIDESGVA YDIFDTKREN NLSVHLMKKL
PESTTDTFVA RINQDKRRQA EANHTATHLL HEALREVLGT HVEQKGSFVS PEVLRFDFSH
FGKMSPEEIR KVEELVSERI RADFQREEFR DVPIAEAQAM GAMALFGEKY GEEVRVLKYG
SSVELCGGTH IPSTGMIGAF RIVTESSIAS GVRRIEAVTG IGAERFIYEK EDILLAVKEL
FNNNPNLIKS IKKMLEEDAS LKKQIADMKH ERMLKFKKSL LEQDVRRRGI RLFLFQEIME
AETAKDIAFQ IAGELQESFV LIAGTTEGGE KCALTVMLSK DLTEGGMDAA KLVRSAAKHI
QGGGGGQPHF ATAGGKNPKG LPAAIQQILT EAELTD
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