| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1241 |
|---|
| Symbol | lepA |
|---|
| ID | 2553188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | + |
|---|
| Start bp | 1315753 |
|---|
| End bp | 1317540 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637149917 |
|---|
| Product | GTP-binding protein LepA |
|---|
| Protein accession | NP_905427 |
|---|
| Protein GI | 34540948 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0481] Membrane GTPase LepA |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAATA TCCGCAACTT CTGCATCATT GCACATATCG ACCACGGCAA GAGTACCTTG
GCCGATCGGT TGCTCGAATA TACCAACACC GTCTCCGGCA AAGATCTGCA AGATCAGGTC
TTGGACAATA TGGACTTGGA ACGAGAGAGA GGTATAACGA TCAAGAGCCA TGCCATTCAG
ATGGACTATG AGATGGATGG AGAAAAGTAT GTGCTCAACC TGATCGATAC TCCGGGGCAC
GTGGACTTCT CCTACGAAGT CTCTCGCTCC ATTGCTGCTT GCGAAGGGGC ATTGCTTATC
GTCGATGCTG CCCAAGGGAT ACAGGCGCAG ACCATATCCA ATCTCTATAT GGCGATCGAA
AACGACCTGA CCATCATCCC TATTGTAAAC AAAGTGGATT TGCCCAGTGC CATGCCCGAA
GAGGTGGAAG ACCAGATCAT CGAGCTTTTG GGTTGCGATC GTTCGGAGAT CATCCGCGCC
AGTGGCAAGA CCGGTCAGGG AGTAGATCAG ATCCTTCGCG CCATCGTAGA GCAAGTACCG
GCCCCTGCCG GAGACCCCGA TGCCCCGCTG CAATGCCTCA TTTTCGATTC GGTCTTCAAT
CCGTTCCGTG GTATCATCGC CTATTTTAAG GTGGTGAATG GCAGTATTCG CAAAGGAGAC
CATGTCAAGT TTATTGCCAC CGAGAAAGAA TACGATGCCG ATGAAGTAGG AGTACTCAGG
CTCGATATGG AGCCGCGCTC GGAGGTCAAG ACCGGCGATG TAGGCTACAT CATCAGCGGT
ATCAAAACAA GCCGCGAGGT CAAGGTCGGC GATACGATCA CCCACGTAGC CAAGCCGGCC
AAAGAGGCTA TAGCTGGATT CGAAGAGGTA AAACCCATGG TCTTCGCCGG TGTATATCCG
ATCGAAGCAG AAGACTTCGA GAACTTGCGT GCTTCCTTGG AGAAACTCCA ACTCAACGAT
GCTTCGCTGA CGTTTCAGCC CGAAAGTTCG GTGGCTCTCG GATTCGGATT TCGTTGCGGA
TTTCTCGGTT TGCTCCACAT GGAGATCGTG CAGGAGCGAT TGGATCGGGA GTTCAATATG
AATGTGATCA CGACGGTGCC CAACGTTTCT TATAAGGTGT ACGACAAGAA AGGTGGCTGC
AAAGAGGTTC ACAATCCATC GGGACTGCTC GAACCCACGC TTATAGATCA TATAGAAGAA
CCCTTCATCA GAGCTTCTGT CATCACCAAT ACGGCCTATA TCGGCCCTAT CATGACACTT
TGTTTGGGCA AAAGAGGGGT GTTGGTGAAG CAAGAATATA TATCGGGCGA TCGTGTAGAG
ATCTTCTACG ATCTTCCATT GGGCGAAATC GTCATCGACT TCTACGACAA ACTAAAGAGT
ATCTCCAAAG GATATGCTTC ATTCGACTAT CACCTGCACG ACTTTAGAGA GAGCAAGCTG
GTAAAGCTCG ATATTCTGCT CAATGGCGAA CCCGTCGATG CCCTGTCTAC ACTCACACAC
GTGGACAACA GTGTCACATT CGGCCGACGC ATGTGCGAAA AGCTCAAAGA ACTCATCCCG
CGTCAGCAAT TCGAAATAGC CATCCAAGCA GCTATCGGAG CCAAGATCAT CGCTCGCGAA
ACGATCAAGC CTGTCCGTAA GGATGTGACG GCCAAGTGCT ATGGTGGCGA TATCTCCCGT
AAGCGTAAGC TGCTCGAAAA GCAGAAAGAA GGAAAGAAAC GCATGAAGCA GATAGGCACG
GTCGAAGTGC CTCAGAAGGC TTTCCTCGCT GTCCTCAAAC TGGACTGA
|
|---|
| Protein sequence | MKNIRNFCII AHIDHGKSTL ADRLLEYTNT VSGKDLQDQV LDNMDLERER GITIKSHAIQ
MDYEMDGEKY VLNLIDTPGH VDFSYEVSRS IAACEGALLI VDAAQGIQAQ TISNLYMAIE
NDLTIIPIVN KVDLPSAMPE EVEDQIIELL GCDRSEIIRA SGKTGQGVDQ ILRAIVEQVP
APAGDPDAPL QCLIFDSVFN PFRGIIAYFK VVNGSIRKGD HVKFIATEKE YDADEVGVLR
LDMEPRSEVK TGDVGYIISG IKTSREVKVG DTITHVAKPA KEAIAGFEEV KPMVFAGVYP
IEAEDFENLR ASLEKLQLND ASLTFQPESS VALGFGFRCG FLGLLHMEIV QERLDREFNM
NVITTVPNVS YKVYDKKGGC KEVHNPSGLL EPTLIDHIEE PFIRASVITN TAYIGPIMTL
CLGKRGVLVK QEYISGDRVE IFYDLPLGEI VIDFYDKLKS ISKGYASFDY HLHDFRESKL
VKLDILLNGE PVDALSTLTH VDNSVTFGRR MCEKLKELIP RQQFEIAIQA AIGAKIIARE
TIKPVRKDVT AKCYGGDISR KRKLLEKQKE GKKRMKQIGT VEVPQKAFLA VLKLD
|
|---|
| |