| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1215 |
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| Symbol | |
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| ID | 2553125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 1294761 |
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| End bp | 1295573 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637149895 |
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| Product | lipoprotein protein, putative |
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| Protein accession | NP_905406 |
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| Protein GI | 34540927 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.839375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAAGCA GAAAGCTCAT TTTTTTCGCC GCACTGACGT TCCTTTTTGC ATCCTGCGGA
GAGTTTGTAA GGATACAGCA AAGCCCCGAT GCATCCCTCA AGTATTCGTA TGCCAAGAAG
TTCTACAACG AACGGAAGTA CAGCAAAGCA GCTTCTCTAT TAGAGGACGT ACGAGGCATA
TATGACGGCA CGAGCGAAGG TGAGCAGCTG ATGTTTCTGT TGGCAGAATG CTATTTAGAG
ATGAGACGCG ATGCCGATGC CGGCATCTGC TATCAAGAGT ACTACAACAA ATACCCCAAA
GGATTGCGCG CCGAAGAAGC TCGTTACAAA GCCGGATATT GCTTCTACGA AGCATCGCCT
GATTCGCGAC TGGATCAGTC GGACACGTAC CTGGCCATTC AGGAATTACA GTCTTATCTC
GACTTTTTCC CCAATGGCAA ATATGCCAAA GAAGCCGAGA ATATGCTGTT CGGTTTGCAG
GACAAGTTGG CCTACAAGGA ATACAGGACG GCCAAGCTCT ACTACAACCT CGGCTTGTAT
TTGGGCAATA ACTACCGTTC TTGCATCGTG ACAGCAGAGG CTGCATTGAA GACTTATCCA
TACACCAAGC ATCGCGAAGA GCTGGTCTTC CTGATGCTTC AGGCTATGTA CGAAGAGGCC
TCTTTCAGCG TCAGTGAAAA GTTGCAAACG CGTTACCGTG ATGTAGCGGA CCAGTACTTT
GCCTACATCA ACGAATTTCC CAACGGGAAA TACCTCAAGC AAGCCAAAAA GATCTACGAC
AGCGTCAGCA AGCATATCTC ACAAGACGCT TGA
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| Protein sequence | MTSRKLIFFA ALTFLFASCG EFVRIQQSPD ASLKYSYAKK FYNERKYSKA ASLLEDVRGI
YDGTSEGEQL MFLLAECYLE MRRDADAGIC YQEYYNKYPK GLRAEEARYK AGYCFYEASP
DSRLDQSDTY LAIQELQSYL DFFPNGKYAK EAENMLFGLQ DKLAYKEYRT AKLYYNLGLY
LGNNYRSCIV TAEAALKTYP YTKHREELVF LMLQAMYEEA SFSVSEKLQT RYRDVADQYF
AYINEFPNGK YLKQAKKIYD SVSKHISQDA
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