Gene PG1159 details

Gene Information

• Locus tag: PG1159
• Symbol: cbiB
• ID: 2553276
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 1238047
• End bp: 1239057
• Gene Length: 1011 bp
• Protein Length: 336 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637149851
• Product: cobalamin biosynthesis protein CbiB
• Protein accession: NP_905362
• Protein GI: 34540883
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1270] Cobalamin biosynthesis protein CobD/CbiB
• TIGRFAM ID: [TIGR00380] cobalamin biosynthesis protein CobD

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAGGGAT CTGTTTTAAT TCTTCTTCTT TTTTTATTGC CGCTGTTGCT GGGATGGTTG 
GCAGACTACT TTTTAGGAGA TCCTCTTTCT CTTCCGCATC CTATAGTCGG CTTCGGTCGC 
ATGATTGCAT TCGGAGAGAA AAGATTGAAT AAAGGAAACT ACCGCAAGGT GAAAGGCGCC 
TTCATGTCGG TGTTCTATAT CGTTGCCGTT TTTCTTTTGA CCCTATTGAT CCTCTTGGGA 
CTTGTTTTTG TCTGTGTTTA TACCATTTTG CTGGACGATT TTTTCCGGAT TGCTGTTGCA 
TTTGCTGTGG CTTCTCTTAT TTTGGCTATC GGCATTTTCT TCTGTTTGGC AGGTACTACC 
CTTATTCGTG AAGTACGTAT GGTATTCGAA GCAGTCGATC GTTCGCTTGA AGAAGGGCGC 
AAACAGGTGA CGCGAATCGT AGGGCGCGAT ACGGCTGCTC TGTCGGCGCA GGAAGTCAGG 
ACGGCAGCTT TGGAGACTTT GTCGGAGAAT CTGAGCGATG GAGTTGTAGC CCCTATGTTC 
TGGTATATGT GGCTGGGATT GCCGGGGATG ATGGCCTATA AGATGATCAA TACCCTTGAT 
TCGATGATCG GCTATAAGAC GGCACGGTAT TTTCTTTTCG GGCGGATAGC TGCCAAAATC 
GACGATGTCG CCAACTATAT TCCTGCAAGG CTTACGGCAT GGCTGATGAT TCTCGTGAGT 
GGGAAGCTCC ACCTGTTCTC TTTTGTTCGT CGTTATGGTC GGCAACATGC AAGTCCTAAC 
TCCGGTTATC CCGAGGCAGC TCTTGCGGGT ATATTGAATT GCCGTTTCGG GGGTACACAT 
GATTATTTTG GAGAAAGCAT CAGCAAGCCT TATATCGGCC ATAACGAACG TGAACTGGCA 
ACGGCAGATA TGCAGATTGC TATTCGTATC AATCGGCGCG TAGAACTGGT GATGCTGTTA 
CTGACATTCG TTGTGAGTTG GATTACCTCC TCGCTCTTTC TTTTTGCCTG A 

 

Protein sequence

MQGSVLILLL FLLPLLLGWL ADYFLGDPLS LPHPIVGFGR MIAFGEKRLN KGNYRKVKGA 
FMSVFYIVAV FLLTLLILLG LVFVCVYTIL LDDFFRIAVA FAVASLILAI GIFFCLAGTT 
LIREVRMVFE AVDRSLEEGR KQVTRIVGRD TAALSAQEVR TAALETLSEN LSDGVVAPMF 
WYMWLGLPGM MAYKMINTLD SMIGYKTARY FLFGRIAAKI DDVANYIPAR LTAWLMILVS 
GKLHLFSFVR RYGRQHASPN SGYPEAALAG ILNCRFGGTH DYFGESISKP YIGHNERELA 
TADMQIAIRI NRRVELVMLL LTFVVSWITS SLFLFA