| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1138 |
|---|
| Symbol | porR |
|---|
| ID | 2553217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 1219684 |
|---|
| End bp | 1220838 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637149835 |
|---|
| Product | pigmentation and extracellular proteinase regulator |
|---|
| Protein accession | NP_905346 |
|---|
| Protein GI | 34540867 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTACTT CCATTTCCCA GCCAATTGTG ATGGTGGATC TGAAAAAGCA GTATCTGCAG
ATGAAAAAAC AGATCGATGA AGCCATCCAT ACAGTTATCG ATAGTACAGC TTTTATCAAC
GGAAAAGAAG TACATGCTTT TGCGGAAGAT TTGGCAGCCT ATTTGGGTGT AAAGCATGTA
ATCCCTTGCG CCAATGGTAC AGACGCATTG CAAATCAGTC TGATGGCTTT GGGATTGAAA
GTCGGAGATG AGATCATTGT GCCCGATTTC ACTTATGCAG CAAGTGCCGA AGCTATAGGT
TTGTTAGGAT TAACACCTGT TTTCGCTGAT GTAGACCCTA TTACATTTAA TCTTACATCT
AAGGGCTGCG AAAAAGTTCT GTCCGACAAG ACGAAAGCAA TCATACCAGT ACACCTCTTT
GGGCAGTCCT GCGATATGGA GCCGCTTTTG GCCTTTGCCA AGCGAAACGA TTTGTTTGTT
ATCGAAGACA ATGCTCAGGC AATGGGAGGG GGATATACTA TCTCCGATGG ATCTATCCGA
AAAACAGGAA CAATGGGGCA TATAGGCTGT GCTTCCTTCT TTCCATCGAA GAATTTGGGT
TGTTATGGAG ACGGTGGTGC TGTCACAACA AATGATGACG AATTGGCAAA GCGAGTGCGA
ATGATAGCGA ACCATGGCCA AAAGATCAAA TACAAACATG ACATTATCGG ATGCAATTCC
CGACTCGATA CTATTCAAGC GGCCATCCTC AGAGTAAAAT TGCAATATTT GGACCGCTTC
AATGCACTTC GGAATGAGGT CGCCTCACAC TATACCTCTC TGCTCGAAGG TATTGAATGG
CTACAAACAC CGACCTCCTT GCAGCAGTCT TCGCATGTTT ATCATCAATA TACTCTTAAG
CTCTTGGATC AGAACACTCG CGATGGACTG CGAGAGCATC TGACGAATCA TAAGATCGCT
TCGATGATAT ACTACCCGAT ACCACTCCAC AGGCAACCGG CATTCGTCGG TATTGCTCAT
TGGGGTGAAT CTTTGGATGT GTCCGACTCT TTGTCGCGAA CTGTTCTCTC CATCCCCATC
TATCCGGAAA TGGAGATAGA GCAAATCCAT GCTGTGGTAT CAGCAATCAA AACATTCGAA
CCGTCTTTAC AATGA
|
|---|
| Protein sequence | MPTSISQPIV MVDLKKQYLQ MKKQIDEAIH TVIDSTAFIN GKEVHAFAED LAAYLGVKHV
IPCANGTDAL QISLMALGLK VGDEIIVPDF TYAASAEAIG LLGLTPVFAD VDPITFNLTS
KGCEKVLSDK TKAIIPVHLF GQSCDMEPLL AFAKRNDLFV IEDNAQAMGG GYTISDGSIR
KTGTMGHIGC ASFFPSKNLG CYGDGGAVTT NDDELAKRVR MIANHGQKIK YKHDIIGCNS
RLDTIQAAIL RVKLQYLDRF NALRNEVASH YTSLLEGIEW LQTPTSLQQS SHVYHQYTLK
LLDQNTRDGL REHLTNHKIA SMIYYPIPLH RQPAFVGIAH WGESLDVSDS LSRTVLSIPI
YPEMEIEQIH AVVSAIKTFE PSLQ
|
|---|
| |