| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1080 |
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| Symbol | |
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| ID | 2552179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 1147506 |
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| End bp | 1148351 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637149781 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase family protein |
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| Protein accession | NP_905295 |
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| Protein GI | 34540816 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.206883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATAG CAGTAGTAGG TACCGGAGCC ATGGGCAGCG GTATCGTTCA ATGTATCGCC
CAAAACGGCC TGGACGTCTT GATGAAAGGG CGAAGCGAGA CTTCTATCAA CAAATCGCTC
AAAGGAATCG AAAAAAATCT CAGCCGTCTG GTTGAAAAGG GCAAGATGTC TGCCGATGAG
CAGCAAGCCG TTATGGCTCG TATCCGTACG ACGATGGACT TCAATGACCT GAAAGATGCC
GGTATCGTGA TTGAAGCGAT TGCCGAAGAA ATGGAAATAA AGAAACAGGC CCTCAGTGCT
GTGGCGGAAG TGGTAAGCGA GCAATGTATC ATCGCTACCA ATACATCTTC ATTGAGTATC
ACAGCTTTGG CAACCGAACT CCCTACCCCA TCTCGTGTGA TCGGAATGCA CTTCTTCAAT
CCCGTTCCCG TGATGAAACT GGTAGAAGTT ATCAGTGCCC AGCAAACTTC GGACGAAGTG
ATGAAGCAGG TACTGGACTT GTGCGAAATG CTCAAGAAAA CAGCCGTACG CGTGAACGAA
GCTCCGGGTT TCGTCGTAAA CCGTCTTCTC ATACCGATGA TCAACGAAGG TATCGGAGCC
TATGCCGACG GTGTGGCCAG CATAGAGGAA ATAGATCAGG CCATGATGCT CGGTGCCAAT
CACCCGATGG GCCCTTTGGC TTTGGGCGAT TTTATCGGTT TGGATGTCTG TCTGGCTATC
ATGGAGGTAT TATTCACCGA ATTTGGTGAT GCCAAATATC GTCCTCATCC TTTGCTTCGC
AAGATGGTTC GTGCAGGACA GCTTGGCCGC AAGACCGGCA AAGGCTTCTA CGACTATAGC
AAATAA
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| Protein sequence | MKIAVVGTGA MGSGIVQCIA QNGLDVLMKG RSETSINKSL KGIEKNLSRL VEKGKMSADE
QQAVMARIRT TMDFNDLKDA GIVIEAIAEE MEIKKQALSA VAEVVSEQCI IATNTSSLSI
TALATELPTP SRVIGMHFFN PVPVMKLVEV ISAQQTSDEV MKQVLDLCEM LKKTAVRVNE
APGFVVNRLL IPMINEGIGA YADGVASIEE IDQAMMLGAN HPMGPLALGD FIGLDVCLAI
MEVLFTEFGD AKYRPHPLLR KMVRAGQLGR KTGKGFYDYS K
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